Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03416 ATGGGTTGTGTTCATGGGAAGTGTTGTAGTCTTTACCCTGCACCATCAATTGGTGGGTCTAGGGACTATAGAGAGCTTGGTCCACAAAAGAAGCATGTGCTTACACAGAGATCACTTCATTTTGTTGATGTTCCTTCTCACAATTTCACTGTGGAGTATTCTATTTTTACTCAGAGAGGTTACTACCCTGACTCACCAGATAAGGAAAATCAAGATTGTTATTGTGTAAAGACTCAACTGCAAGGTAACCCTAATGTTCATTTCTTTGGTGTTTTTGATGGACATGGTGAATTTGGTGGGCAGTGTTCTAATTTTGTTAAGAATAGGTTGGTAGAAAAACTGTCAAATGATTCTGCCTTGTTAGAGGATCCTGTTAAGGCTTATAATTCGGCTTTTTTGGATACTAATGATGACTTGCACAAGAATGAGATTGATGATTGTATGAGTGGTACTACCGCGATTACGGTGTTGGTTATAGGGGACACGCTTTATGTTGCGAATGTTGGTGATTCGAGGGCGGTTCTGGCTGTTAAAGATGGGAATAGAATTGTTGCTCAGGATTTGTCCTCTGATCAGACACCGTTTAGGAGAGATGAGTATGAGAGAGTGAAGCTTTGTGGTGCTAGGGTTTTGAGTGTTGATCAGGTGGAAGGGCATAAGGATCCGGATATTCAGACTTGGGGCGATGAAGAGAGCCAGGGTGACGATCCTCCGCGATTGTGGGTTCAGAATGGGATGATTCCTGGAGCTGCTTTTACAAGGAGTGTAGGAGATAGTTTGGGTGAGACTATCGGGGTTATTGCGGTTCCGGAGGTGTTAACGGTTCAGCTTACACCTAATCATCTTTTCTTTGTTGTTGCAAGTGATGGGGTATTTGAGTTCCTATCAAGCCAAACTGTTGTTGATATGGCCGCGAGTTATTCCGATCCGCGTGATGCATGTGCTGCCATTGCTGGAGAGTCTTATAAATTATGGTTGGAACATGAAGGTCGAACAGATGATATAACAATTATCATTGTTCAGATCAAAGGCCTGTCTAATGTACATCTGAATACGGATCAGGAGAGATCAATTTCAGCGCCGTAA 1086 0.4273 MGCVHGKCCSLYPAPSIGGSRDYRELGPQKKHVLTQRSLHFVDVPSHNFTVEYSIFTQRGYYPDSPDKENQDCYCVKTQLQGNPNVHFFGVFDGHGEFGGQCSNFVKNRLVEKLSNDSALLEDPVKAYNSAFLDTNDDLHKNEIDDCMSGTTAITVLVIGDTLYVANVGDSRAVLAVKDGNRIVAQDLSSDQTPFRRDEYERVKLCGARVLSVDQVEGHKDPDIQTWGDEESQGDDPPRLWVQNGMIPGAAFTRSVGDSLGETIGVIAVPEVLTVQLTPNHLFFVVASDGVFEFLSSQTVVDMAASYSDPRDACAAIAGESYKLWLEHEGRTDDITIIIVQIKGLSNVHLNTDQERSISAP 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03416 361 SUPERFAMILY PP2C-like 40 344 IPR036457 -
Vivi4g03416 361 PANTHER PROTEIN PHOSPHATASE 68 341 IPR015655 GO:0004722|GO:0006470
Vivi4g03416 361 ProSiteProfiles PPM-type phosphatase domain profile. 52 342 IPR001932 -
Vivi4g03416 361 SMART PP2C_4 48 340 IPR001932 -
Vivi4g03416 361 CDD PP2Cc 68 342 IPR001932 -
Vivi4g03416 361 ProSitePatterns PPM-type phosphatase domain signature. 88 96 IPR000222 GO:0043169
Vivi4g03416 361 Gene3D - 39 344 IPR036457 -
Vivi4g03416 361 Pfam Protein phosphatase 2C 79 317 IPR001932 -
Vivi4g03416 361 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 47 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03416 Vivi-Chr4 150967960 150970581 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03416 1 347 PP2C-type Phosphatase Gene Family AT3G06270 72.334 0.0 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03416 - - aprc:113872580 647.121