Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03405 ATGATTGTAAAGGAGCATGCTGTTGGTACTGAACTGGTAATGAGTAATGTAATTGGGGAGGAGGAAATTGATTTTTCTTGTGATCCATACGTAGGGTTGGAGTTTTTCAATGCAGATGATGCACTTAGGTATTATATATCATATGCTACTCGAATGGGATTTAAAGTTCGTATTGGTCAGCTTTATCGATCCAGAACTAATGGATCGGTTTCTTCTCGGAGATTCGTGTGTTCGAAGGAGGGACATCAGCTCAGCTCGAGAACTGGCTGTCCAGCATTCATAAGGGTGCAGTTAAATGATTCTGGAAAGTGGGTTGTTGATCATTTTCACAAGGAGCATAACCATAATCTTGAAAATGAAAGTGAAAATTTCGCTCCAACGTTGCAGCCGATGGGTTCTGCCAATGTTGATTCTTCAACCGCAATCACTCGCAGGCCGAGGAAGAAATTGCTTGAAGTAACCAATGGTGAACCTATTTGTCCTTTTGGTGTTATTAATTTCAAGCGTCTAAGAAAAGAAGAACTTGAAGGACAGGCTAGGGTTGAACCACATGTTGGTCAAGAGTTCAGTAGCCCTGTTGAAGCCTACCAATTTTATCATGCTCATGCAGCATATAAGGGTTTTAAAATTCGAAATGGTCAATTGTTTCGTTCTAAAAATGACGGGGGTATTACATCACGACGCTTTGTGTGTTCAAAAGAAGGGTTCCAACACCCTTCAAGAGTTGGTTGTAAGGCTTATTTAAGGATTAAGAGACAGCCATCTGGAAAGTGGGTTGTCGACCGTCTTGAAAAAGATCATAATCATGACCTGAGCACTGAAAAGGAACATAGGACAGCAAGTCTTCCTGCTTCTAATATTTTAACTGAGGAGGTAAACACTGAATTGGTGAACAACGACATGTTTAGGATAGATAACTACCCTGTCCTGAGAGGAGGGAGACAAAATCACATCAGAGGTGATTGGTATAATATGCTTTTAGAGTATTTTCAATCAAGACAAGCTGAAGATACAGGTTTCTTTTATGCCATGGAAGTTGATAATGGTAATTGCATGAGCATATTCTGGGCTGATGGCAGATCTAGATACTCATGTAGTCAGTTTGGCGATGTCCTTGTTGTAGACACATCATATAGAAAGAGTCTCTCTATGGTACCATTTGCTACTTTTGTGGGGGTTAATCACCACAAGCAACCCGTCCTTCTTGGTTGTGCTCTAATTGCTGATGAATCTGAAGAGTCTTTCACTTGGTTGTTTCAGACATGGCTAAGAGCAATGAGTGGTCGGCAGCCTCTGTCGGTAATAGCTGATCAAGACGTTTCAATCCAGAGAGCAGTAGCAAAAGTATTTCCAGTAACCAATCACCGCTTTTCATTGTGGCAAATTAATGCAAAGGAACAAGAGCTTGCGGGTCTGATGGGTCATGGATTCACTAAAGATTATGAAAAGTGTGTTTACCAGAGCCAGACAGTTGATGAATTTGACACCGCATGGAATGCTCTACTCATCAAATATGGATTGAAGGACAATGCTTGGCTAAAAGAAATGTACGATAAACGTGCATCTTGGGTTCCCTTCTATATAAAGAGCACATTTTCAGCCGGAATTCCTTTGAAAGAAAGCATGGAATCATTCTTTGGTGCGCTTTTAAATGGCCAAACACCTCTCCCAGAGTTCATTCAACGGTACGAAAGAGGTCTTGAGCGACGTCGTGAAGAAGAACGAAAAGAGGATTTTAACACTTCTAATTTTCAAACTTTTTTGCAAACAAAAGAACCTGTAGAAGAACAATGTAGAAGGCTTTACACTCTTGCAATATTCAAAGTATTTCAAAAAGAGCTTTTGCAGTGCTATAGTTATCTTGGGTTTAAAATCTATGAAGAAGGGCCCCTCAGCAGATATTTGGTGCGCAAGTGTGGAAATGAGGACATGGAGAAGCATGTAGTTACATTCAATGCATCCAATATTGACATTAATTGTAGCTGTCAGATGTTTGAATATGAAGGTGTTCTCTGTAGACATGTGTTGAGGGTCTTCCAAATATTGGAATTAAGAGAAGTTCCTTCACGCTACATCCTACATCGCTGGACCAGAAATGCCGAGGATGGTGTTTTTCCTGACATAGAATCATGGAGTAGCTCCCAGGAGCTAAAAAGTTTGATGCTGTGGAGTCTAAGAGAAACAGCGTCTAAATACATAGATGCCGGTGCATCATCCATTGAAAAGTATAAACTTGCCTATGAGATTTTGCGCGAGGGTGGAAGAAAGCTGTGCTGGCATAGGTGA 2286 0.4077 MIVKEHAVGTELVMSNVIGEEEIDFSCDPYVGLEFFNADDALRYYISYATRMGFKVRIGQLYRSRTNGSVSSRRFVCSKEGHQLSSRTGCPAFIRVQLNDSGKWVVDHFHKEHNHNLENESENFAPTLQPMGSANVDSSTAITRRPRKKLLEVTNGEPICPFGVINFKRLRKEELEGQARVEPHVGQEFSSPVEAYQFYHAHAAYKGFKIRNGQLFRSKNDGGITSRRFVCSKEGFQHPSRVGCKAYLRIKRQPSGKWVVDRLEKDHNHDLSTEKEHRTASLPASNILTEEVNTELVNNDMFRIDNYPVLRGGRQNHIRGDWYNMLLEYFQSRQAEDTGFFYAMEVDNGNCMSIFWADGRSRYSCSQFGDVLVVDTSYRKSLSMVPFATFVGVNHHKQPVLLGCALIADESEESFTWLFQTWLRAMSGRQPLSVIADQDVSIQRAVAKVFPVTNHRFSLWQINAKEQELAGLMGHGFTKDYEKCVYQSQTVDEFDTAWNALLIKYGLKDNAWLKEMYDKRASWVPFYIKSTFSAGIPLKESMESFFGALLNGQTPLPEFIQRYERGLERRREEERKEDFNTSNFQTFLQTKEPVEEQCRRLYTLAIFKVFQKELLQCYSYLGFKIYEEGPLSRYLVRKCGNEDMEKHVVTFNASNIDINCSCQMFEYEGVLCRHVLRVFQILELREVPSRYILHRWTRNAEDGVFPDIESWSSSQELKSLMLWSLRETASKYIDAGASSIEKYKLAYEILREGGRKLCWHR 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03405 761 SMART 26again6 658 685 IPR006564 GO:0008270
Vivi4g03405 761 ProSiteProfiles Zinc finger SWIM-type profile. 647 683 IPR007527 GO:0008270
Vivi4g03405 761 Pfam SWIM zinc finger 654 680 IPR007527 GO:0008270
Vivi4g03405 761 Pfam FAR1 DNA-binding domain 43 117 IPR004330 -
Vivi4g03405 761 Pfam FAR1 DNA-binding domain 197 272 IPR004330 -
Vivi4g03405 761 Pfam MULE transposase domain 371 464 IPR018289 -
Vivi4g03405 761 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 19 123 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03405 Vivi-Chr4 150642154 150645176 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi4g03405 MULE 4.5e-22 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03405 - - mtr:112419201 1399.03