Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03326 ATGATCACTTCAATCAAGTGCACACCATCATCACTCACCAACTCTACTTTCTCAAGCACAAAACTTTTACTTCCAAGGTCTCAACTTTCAATTCAACCAACCAATCAAAATGTTGAACAAAACATGGCCCTCCCTTTATTTTCTTTCAAAAAACCTCTCTACCTTTCACCCATTGAGAGTTTTGCATTGCTAGTAAAGCCCAAAAGAAAGAATGTAACAGAATGTCAAGCCTATGAGGCTGATAGATCAAGGCCATTAGAGATTAACATTGAGCTTCCTAGTGATGAAGCAGCTCAAAAGGTTAAAATTGGATTGTATTTTGCTACTTGGTGGGCTTTGAATGTTGTTTTCAATATATACAACAAGAAAGTTTTGAATGTTTTTCCTTACCCTTGGCTTACTTCCACTTTGTCCTTAGCTGCTGGTTCTCTCATCATGTTAATCTCATGGGCCACTAGGGTTGCTGAGGCCCCAAAAGTTAGTTTGGACTTCTGGAAAGCCCTTTTTCCCGTAGCTGTGGCACACACAATTGGGCATGTTGCTGCAACTGTGAGCATGTCCAAAGTAGCAGTTTCATTCACTCACATCATCAAGAGTGGAGAACCAGCTTTCAGTGTGCTTGTATCAAGAATCTTGCTTGGAGAAGCATTTCCCATGCAAGTTTACCTTTCATTGTTGCCAATAATTGGTGGTTGTGCACTAGCTGCTGTGACTGAGCTCAATTTCAATATGATTGGATTCATGGGAGCTATGATATCAAATATGGCATTTGTATTCAGAAACATATTCTCCAAGAAAGGGATGAATGGAATGAGTGTTAGTGGAATGAACTACTATGCGTGTCTTTCAATGTTATCTTTATTAATTCTCACACCTTTCGCCATTGCTGTCGAGGGTCCTAAACTCTGGGCTGCTGGCTGGCAAACAGCAGTGTCTCAGATTGGCCCCAATTTCGTATGGTGGGTAGTTGCACAGAGTGTGTTCTACCATTTGTATAATCAAGTCTCATACATGTCTCTTGATCAGATTTCTCCTTTAACATTTAGCATAGGAAACACAATGAAGAGAATTTCTGTAATAGTCTCTTCCATTCTTATCTTTCACACGCCACTTCGTCCTATCAATGCTCTTGGAGCAGCAATCGCGATTCTTGGAACCTTCATCTATTCGCAGGCTAAAGAGAAATAA 1188 0.4032 MITSIKCTPSSLTNSTFSSTKLLLPRSQLSIQPTNQNVEQNMALPLFSFKKPLYLSPIESFALLVKPKRKNVTECQAYEADRSRPLEINIELPSDEAAQKVKIGLYFATWWALNVVFNIYNKKVLNVFPYPWLTSTLSLAAGSLIMLISWATRVAEAPKVSLDFWKALFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRILLGEAFPMQVYLSLLPIIGGCALAAVTELNFNMIGFMGAMISNMAFVFRNIFSKKGMNGMSVSGMNYYACLSMLSLLILTPFAIAVEGPKLWAAGWQTAVSQIGPNFVWWVVAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSILIFHTPLRPINALGAAIAILGTFIYSQAKEK 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03326 395 Pfam Triose-phosphate Transporter family 102 390 IPR004853 -
Vivi4g03326 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 143 237 - -
Vivi4g03326 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 293 391 - -
Vivi4g03326 395 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 102 394 IPR004696 GO:0016020|GO:0022857|GO:0055085
Vivi4g03326 395 PANTHER SOLUTE CARRIER FAMILY 35 102 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03326 Vivi-Chr4 148633556 148635684 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03326 35 395 Antiporters AT1G61800 78.393 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03326 K15283 K05350 gmx:100804205 645.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g03326 4 148633556 148635684 Vivi4g03326 4 148633556 148635684 ECH
Vivi4g03326 4 148633556 148635684 Vivi5g00045 5 426694 429025 PCT