LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi4g03294	ATGGCTGAGGCTGCACAATCCAATGCTGAGCTGTTGGAATGGCCGAAGAAAGATAACCACCGATTCCTGCATGTTGTTTACCGTGTTGGTGATCTCGATCGCACCATCAAGTTTTATACTGAAGTTTTTGGAATGAAGCTTCTGAGGAAACGAGATGTTCCGGAAGAGAAATATACCAATGCTTTTCTTGGATTTGGTCCTGAACAAACTAATTTTGTTGTGGAATTAACTTATAATTACGGGGTGACCTCGTATGACATTGGGACTGGCTTTGGACATTTTGCTATCGCAACTCCAGATGTCTACAAATTTGTTGAAGAGATCCGAGCTAAGGGTGGAGTCGTCACTAGGGAGCCTGCTCCAATTGGTGACATTGTTATTGCCTTTGTGAAGGATCCTGATGGTTATGAATTTGAAATTCAACAAAAAGCTTCAACCCCTGAGCCATTATGCCATATATTGTATCGTGTTGGTGACTTAGACCGCTCAATTAAGTTTTACGAAAAGGCTTTGGGATTCAAGCTGCTCAAGAAGTATGATTTACCTGAATACAAGATAACTTTTGCTATTATTGGATATGGTGAAGAGCCCGAGAGAGTTGTGTTGGAGTTATTATATAACTATGGTGTCACTGAATACACCAAGGGAAATGCTTATGCACAGGTTGCTATTGGCACTGATGATGTGTACAAGAGCGCTGAGGTAGTCAAGATAGTCACTGAAGAGCTTGGAGGGAAGATTACCAGGCAACCAGGGCCAATTCCTGGCATTAACACGAAGATCACTTCTTTCCTAGATCCAGATGGATGGAAAATTGTGTTGGTCGATAATCAAGATTTTCTGAAAGAGTTGGAGTGA	858	0.4172	MAEAAQSNAELLEWPKKDNHRFLHVVYRVGDLDRTIKFYTEVFGMKLLRKRDVPEEKYTNAFLGFGPEQTNFVVELTYNYGVTSYDIGTGFGHFAIATPDVYKFVEEIRAKGGVVTREPAPIGDIVIAFVKDPDGYEFEIQQKASTPEPLCHILYRVGDLDRSIKFYEKALGFKLLKKYDLPEYKITFAIIGYGEEPERVVLELLYNYGVTEYTKGNAYAQVAIGTDDVYKSAEVVKIVTEELGGKITRQPGPIPGINTKITSFLDPDGWKIVLVDNQDFLKELE	285

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi4g03294	285	SUPERFAMILY	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	20	145	IPR029068	-
	Vivi4g03294	285	ProSitePatterns	Glyoxalase I signature 1.	152	173	IPR018146	GO:0004462\|GO:0046872
	Vivi4g03294	285	PANTHER	LACTOYLGLUTATHIONE LYASE	4	285	-	-
	Vivi4g03294	285	ProSiteProfiles	Vicinal oxygen chelate (VOC) domain profile.	149	277	IPR037523	-
	Vivi4g03294	285	FunFam	Lactoylglutathione lyase	146	285	-	-
	Vivi4g03294	285	Gene3D	-	146	285	IPR029068	-
	Vivi4g03294	285	ProSiteProfiles	Vicinal oxygen chelate (VOC) domain profile.	21	143	IPR037523	-
	Vivi4g03294	285	Gene3D	-	1	145	IPR029068	-
	Vivi4g03294	285	ProSitePatterns	Glyoxalase I signature 1.	24	45	IPR018146	GO:0004462\|GO:0046872
	Vivi4g03294	285	NCBIfam	lactoylglutathione lyase	22	144	IPR004361	GO:0004462\|GO:0046872
	Vivi4g03294	285	CDD	GlxI_Ni	23	140	-	-
	Vivi4g03294	285	ProSitePatterns	Glyoxalase I signature 2.	88	100	IPR018146	GO:0004462\|GO:0046872
	Vivi4g03294	285	Pfam	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	152	272	IPR004360	-
	Vivi4g03294	285	Pfam	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	22	140	IPR004360	-
	Vivi4g03294	285	SUPERFAMILY	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	150	277	IPR029068	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi4g03294	Vivi-Chr4	147687589	147689868	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi4g03294	152	276	Calmodulin-binding Proteins	AT1G08110	28.667	3.76e-10	57.0

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi4g03294	K01759		-	gmx:100799447	493.426