Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03293 ATGGCTGAGGCTGCACAATCCAATGCTGAGCTGTTAGAATGGCCGAAGAAAGATAACCACCGATTCCTGCATGTTGTTTACCGTGTTGGTGATCTCGATCGCACCATCAAGTTTTATACTGAAGTTTTTGGAATGAAGCTTTTGAGGAAACGAGATGTTCCGGAAGAGAAATATACCAATGCTTTTCTTGGATTTGGTCCTGAACAAACTAATTTTGTTGTGGAATTAACTTATAATTATGGAGTGACCTCGTATGATATTGGAACTGGCTTTGGACATTTTGCAATCGCAACTCCAGATGTCTACAAATTTGTTGAAGAGATCCGAGCTAAGGGTGGAGTCGTCATTAGGGAGCCTGCTCCAATTGGTGACACTGTTAATGCCTTTGTGAAGGATCCTGACGGTTATGAATTTGAAATTCAACAAAAAGCTTCAACCCCTGAGCCATTATGCCATATGTTGTTTCGTGTTGGTGACTTAGACCGCTCAATTAAGTTTTACGAAAAGGCTTTGGGTTTCAAGCTTTTGAACAAGTATGATTTACCTGAATACAAGATAACTTTTGCTATTATTGGATATGGTGAAGAGCCCGAGAGAGTTGTCTTGGAGTTATTATATAACTATGGTGTCACTGAATACACCAAGGGAAATGCTTATGCACAGGTTGCTATTGGCACTGATGATGTATACAAGAGCGCTGAGGTAGTCAAGATAGTCACTGAAGAGCTTGGAGGAAAGATTACCAGGGAACCAGGGCCAATTCCTGGCATTAACACAAAGATCACTTCTTTCTTAGATCCAGATGGATGGAAAATTGTGTTGGTCGATAATCAAGATTTTCTGAAGGAGTTGGAGTGA 858 0.4068 MAEAAQSNAELLEWPKKDNHRFLHVVYRVGDLDRTIKFYTEVFGMKLLRKRDVPEEKYTNAFLGFGPEQTNFVVELTYNYGVTSYDIGTGFGHFAIATPDVYKFVEEIRAKGGVVIREPAPIGDTVNAFVKDPDGYEFEIQQKASTPEPLCHMLFRVGDLDRSIKFYEKALGFKLLNKYDLPEYKITFAIIGYGEEPERVVLELLYNYGVTEYTKGNAYAQVAIGTDDVYKSAEVVKIVTEELGGKITREPGPIPGINTKITSFLDPDGWKIVLVDNQDFLKELE 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03293 285 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 149 277 IPR037523 -
Vivi4g03293 285 ProSitePatterns Glyoxalase I signature 1. 24 45 IPR018146 GO:0004462|GO:0046872
Vivi4g03293 285 ProSitePatterns Glyoxalase I signature 2. 88 100 IPR018146 GO:0004462|GO:0046872
Vivi4g03293 285 Gene3D - 1 145 IPR029068 -
Vivi4g03293 285 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 21 143 IPR037523 -
Vivi4g03293 285 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 20 145 IPR029068 -
Vivi4g03293 285 Gene3D - 146 285 IPR029068 -
Vivi4g03293 285 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 150 277 IPR029068 -
Vivi4g03293 285 PANTHER LACTOYLGLUTATHIONE LYASE 4 285 - -
Vivi4g03293 285 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 22 140 IPR004360 -
Vivi4g03293 285 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 152 272 IPR004360 -
Vivi4g03293 285 NCBIfam lactoylglutathione lyase 22 144 IPR004361 GO:0004462|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03293 Vivi-Chr4 147651114 147653285 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03293 152 276 Calmodulin-binding Proteins AT1G08110 28.667 1.07e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03293 K01759 - gmx:100799447 486.108