Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03292 ATGGCTGAGGCTGCACAATCTAATGCTGAGCTGTTGGAATGGCCAAAGAAAGATAAGCGCCGCTTCCTGCATGCTGTTTACCGTGTTGGTGATCTTGAACGCACCATTAAGTTTTATACTGAAGCTTTTGGAATGAAGCTTTTGAGGAAAAGAGATGTTCCGGAAGAGAAATATGCCAATGCTTTTCTTGGATTTGGCTCTGAACAAACTAATTTTGTTGTGGAATTAACTTATAATTATGGAGTGTCCTCGTACGATATTGGAACTGGCTTTGGACATTTTGCTATCGCAACTCCAGATGTCTACAAATTTGTTGAAAACGCCCGGGCTAAGGGTGGAAATGTCACTAGGGAGCCTGGTCCAGTTAGTGGTGGGTCAACTATTATGGCCTTTGTAAAGGATCCTGATGGTTATGCTTTTGAAATTCTCCAAAGAGCTTCAACCCCTGAGCCATTATGCCAAGTGATGCTCCGTGTTGGTGACTTAGACCGCTCAATTGCCTTTTATGAAAAGACTTTGGGTTTGAAGCTGGTGAGGAAGGTTGATAGACCTCAATACACGTACACTTTAGCTATGCTTGGGTATGCAGAGGAGTACGAGACAGTTGTGTTGGAGCTGACATATAACTATGGTGTCACTGAATACACCAAGGGAAATGGTTATGCACAGGTTGCTATTGGCACTGATGATGTATACAAGAGTGCTGAGGTAGTCAACATAGTAACTCAAGAGCTTGGAGGGAAGATTACCAGGGAACCAGGGCCAATTCCTGGCCTTAACACAAAGATCACTTCTTTCTTGGATCCAGATGGATGGAAAACAGTGTTGGTTGACAATCAAGATTTTCTGAAGGAGCTGGAGTGA 864 0.434 MAEAAQSNAELLEWPKKDKRRFLHAVYRVGDLERTIKFYTEAFGMKLLRKRDVPEEKYANAFLGFGSEQTNFVVELTYNYGVSSYDIGTGFGHFAIATPDVYKFVENARAKGGNVTREPGPVSGGSTIMAFVKDPDGYAFEILQRASTPEPLCQVMLRVGDLDRSIAFYEKTLGLKLVRKVDRPQYTYTLAMLGYAEEYETVVLELTYNYGVTEYTKGNGYAQVAIGTDDVYKSAEVVNIVTQELGGKITREPGPIPGLNTKITSFLDPDGWKTVLVDNQDFLKELE 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03292 287 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 21 145 IPR037523 -
Vivi4g03292 287 ProSitePatterns Glyoxalase I signature 1. 154 175 IPR018146 GO:0004462|GO:0046872
Vivi4g03292 287 NCBIfam lactoylglutathione lyase 22 147 IPR004361 GO:0004462|GO:0046872
Vivi4g03292 287 Gene3D - 1 147 IPR029068 -
Vivi4g03292 287 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 151 279 IPR037523 -
Vivi4g03292 287 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 152 279 IPR029068 -
Vivi4g03292 287 Gene3D - 148 287 IPR029068 -
Vivi4g03292 287 FunFam Lactoylglutathione lyase 148 287 - -
Vivi4g03292 287 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 20 146 IPR029068 -
Vivi4g03292 287 ProSitePatterns Glyoxalase I signature 2. 88 100 IPR018146 GO:0004462|GO:0046872
Vivi4g03292 287 PANTHER LACTOYLGLUTATHIONE LYASE 4 287 - -
Vivi4g03292 287 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 23 142 IPR004360 -
Vivi4g03292 287 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 154 273 IPR004360 -
Vivi4g03292 287 CDD GlxI_Ni 23 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03292 Vivi-Chr4 147633783 147639672 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03292 154 278 Calmodulin-binding Proteins AT1G08110 26.667 1.03e-10 58.9