Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03266 ATGGCCTGGACTAGAGGTAGAATCATCGGCCGGGGCTCAACCGCCACCGTCTACCTCGCGGAACATCGCGATTCAGATGAAGTGTTTGCGGTGAAATCTACGGAGTTTCACCGCTCGGAGTTTCTGAAGAGAGAACAAGAGATTCTCTCGAAGGTTGATTGTCCACAAATTGTGGACTACAGAGGTTGTGATGTCACGTTTGAGAATGGTGTTCATTTGTTAAATTTGTTCATGGAGTATGCATCTAAGGGAACACTAGCTGATGCGGTTCGGAATGGGAATGGAAATGGAAATGGAATGGAAGAAGGTTTGGTGGGATTCTACGCGCGCCAAATTCTACTTGGACTTGATTACCTTCATTCGAATGGTATAGTGCATTGTGATTTGAAGGGACAGAATGTGTTGATGACGGAACAAGGTGTGAAGATTGCTGATTTCGGTTGTGCTCGGAGGGTGGAGGAGGAGTTGGTGATTTCTGGTTCGCCGGCTTTCATGGCGCCGGAGGTTGCGCGTGGGGAGGAGCAGGGGTTTGCTGCTGATGTGTGGGCTTTGGGATGTACTGTGTTGGAGATGATCACTGGGAAAATGCCGTGGCAGGGGGTTTCTGATCCGGCCGCGGTTTTGTATCGGGTTGGATTCTCCGGGGATGTGCCGGAGATTCCTAATTTTGTGTCGGAGCAGGGGAGGGATTTTTTGAGGAAGTGTTTGAAGAGAGATCCAAATGAGAGGTGGTCGGTGGTTGAGCTTCTCGGACATGAGTTTGTTGGGAAGTTTAAGGAATCTATGTCTGATTTGGAAACTCCGACGACTGTGTTGGAAGGAGGTTTTTGGGATTGGGATTCTTTGGAAACAACTCAGGAGGTGGGTTCCACATCTGATTGTTGTTCCTTGGATTCTTCGAGTCATTCTTCGAGTAATTCTTCGAGTCCGCGAGACAGAATTCTAGGATTGTGTTCCAATGAGACAGTTTGGGAATTTGATGATGATGATGATGATGATGATGATGATTGGATCACTGTGAGAAGCAATGGAGAGGATTTGGATGCAATGTCATTTGGAAAAATGGAAGAGAATGAATCAGACATTGTTCTTGAATTTGGTGATCATGAGATTGATTTGAGTTTGGTAGATTTTTATGAACCAAAAATTGTAGTTGAATTGAGTACATGGAATGTCAATTTTGATTATTGGTGTTTTAGAAGCTGCAATTGTGGCTGTTTTGTTAGTGATTTTTTATCAGTTTGTCAATCTAGAAAGATTGTTCTCTATGTAATAATTGATTCTCAGAAGAAAAACAAAGAAATTTTTATCATCCCCTGCTTTCTACTTTTTGCTTTCTCTTTAACTTCTCATTGGATAGACAGATTGAACATTTTACAATATAATAAGAAAAATTATGTGTCTGGTTAG 1410 0.4298 MAWTRGRIIGRGSTATVYLAEHRDSDEVFAVKSTEFHRSEFLKREQEILSKVDCPQIVDYRGCDVTFENGVHLLNLFMEYASKGTLADAVRNGNGNGNGMEEGLVGFYARQILLGLDYLHSNGIVHCDLKGQNVLMTEQGVKIADFGCARRVEEELVISGSPAFMAPEVARGEEQGFAADVWALGCTVLEMITGKMPWQGVSDPAAVLYRVGFSGDVPEIPNFVSEQGRDFLRKCLKRDPNERWSVVELLGHEFVGKFKESMSDLETPTTVLEGGFWDWDSLETTQEVGSTSDCCSLDSSSHSSSNSSSPRDRILGLCSNETVWEFDDDDDDDDDDWITVRSNGEDLDAMSFGKMEENESDIVLEFGDHEIDLSLVDFYEPKIVVELSTWNVNFDYWCFRSCNCGCFVSDFLSVCQSRKIVLYVIIDSQKKNKEIFIIPCFLLFAFSLTSHWIDRLNILQYNKKNYVSG 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03266 469 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 346 - -
Vivi4g03266 469 Pfam Protein kinase domain 4 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g03266 469 CDD STKc_MAPKKK 3 255 - -
Vivi4g03266 469 MobiDBLite consensus disorder prediction 293 312 - -
Vivi4g03266 469 ProSiteProfiles Protein kinase domain profile. 3 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g03266 469 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Vivi4g03266 469 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Vivi4g03266 469 SUPERFAMILY Protein kinase-like (PK-like) 3 276 IPR011009 -
Vivi4g03266 469 SMART serkin_6 3 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g03266 469 Gene3D Transferase(Phosphotransferase) domain 1 2 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03266 Vivi-Chr4 147178308 147180069 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03266 1 277 MAP Kinase Kinase Kinase AT2G32510 52.041 2.66e-100 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Vivi4g03266 Pkinase 2.2e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03266 K20716 - gmx:100802174 439.113