Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03259 ATGGACAAAGGTTGGGGACTTGCTCTTGACACTTCTTCTTCCTCTCCGATTCCAATATCTCACTCTTTTTTACCTTCCAAACACACCAACACCACCAACGATAGAATGTTTCCTATTTTAGGCTTCCCTGTAAACCTCACCCGCAACACCAACGCTGAAGACGATGGTGATCGGAAAATAACCGGCGAAGTCGATTTCTTCTCTGAAAGAAACACATCATCACCTTCAGCTTCACACGATCATCATGTTGTCAAACACAATAACATCAAAAAGGAGATCATTTCAACCGATGTAAAACCTTCCACTTCCAATATTCACGTTAATACCGGCTTACAACTTGCAAACACCGGAAGTGATCAATCTGCAGTGGATGATGCAGTTTCATCTGATGCCAAGACAACTGAGCTTGCACAGTTGCAAATGGAGCTTCAACGGATGAACTCAGAGAACAAAAAGCTGAAAGAGATGCTTAATCATGTTACCGGTAATTACACCGCTATGCAGATGCAGCTCATGGCATTAATGCAAAAGAATCGCCATACAGAAAATGAGGTTGTTAATGCAAAAGCTGAGGATAAAAACCAAGGTGTTGGTGGAGCAATTGTACGGAGGCAGTTTCTTGAGATAGGGACTAATGGAACAGCTGAAGTTGATGATAGAGTATCAAATTCTTCATCAGATGAAAGAACAAGATCAAACACACCTCAGAATAGTCTTATTGAAGCTGGAGCTAGAGATCATATGAGAAATAACAATGGTAAAAATGGAAGAGAAGATAGTCCAGATTCAGAATCACAAGGTTGGGGTCCTAATAAGGTTCAGAAAATACTCAACTCTTCCAATGTTGCTGAACAATCAGCTACGGAGGCTACAATGAGAAAAGCTCGTGTCTCCGTTCGCGCTAGATCAGAAGCTTCAATGATTAGTGATGGATGCCAATGGAGAAAATATGGACAGAAAATGGCGAAAGGAAATCCATGTCCTCGAGCATACTACCGATGCACTATGGCTGTTGGTTGTCCAGTTCGCAAACAAGTTCAACGTTGTGCTGAGGACAAAACAATATTGGTAACAACATATGAAGGAACACACAACCATCCACTTCCACCAGCAGCTATGGCAATGGCATCAACAACCTCAGCAGCAGCAAGCATGTTACTATCAGGTTCAATGTCAAGTGCAGATGGAATCATGACCCCAAATTTATTAGCAAGAGCTATTCTTCCTTGCTCCACAAGCATGGCAACACTTTCAGCCTCAGCACCATTCCCAACTGTTACATTGGATCTAACACAAAACTCAAACCCAATCCAAAATCCAAATCCATTGCAACAATTTCCAAGACCTCATCATGCACCATTTCAAGTGCCTAGTTTCTTTCAAGGACAACAACCTCAGAATTTTCAACAAGCTGCAGCAGCAGCATCGCTTTATAATCAATCCAAATTCTCTGGTCTTCAATTATCTCAAGAAGTTGGTTCTTCTCATTTAACAACCACACAAGCCCCAACACAACAACAACAACAAGAGCAGCAGCAACAACAATCTTCCTTAGCAGACTCTGTCAGCGCCGCCACTGCCGCTATCACTTCCGATCCAAACTTCACCGCTGTTCTCGCTGCCGCTATCTCCTCCATCATCGGTGGTGGTGGTCATGGAAACAACAACAGCGGCAGCAACAACAACAATAGCAGAAGTACAGTTAGCAACTTTTCAGGAAACTAA 1725 0.4267 MDKGWGLALDTSSSSPIPISHSFLPSKHTNTTNDRMFPILGFPVNLTRNTNAEDDGDRKITGEVDFFSERNTSSPSASHDHHVVKHNNIKKEIISTDVKPSTSNIHVNTGLQLANTGSDQSAVDDAVSSDAKTTELAQLQMELQRMNSENKKLKEMLNHVTGNYTAMQMQLMALMQKNRHTENEVVNAKAEDKNQGVGGAIVRRQFLEIGTNGTAEVDDRVSNSSSDERTRSNTPQNSLIEAGARDHMRNNNGKNGREDSPDSESQGWGPNKVQKILNSSNVAEQSATEATMRKARVSVRARSEASMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTILVTTYEGTHNHPLPPAAMAMASTTSAAASMLLSGSMSSADGIMTPNLLARAILPCSTSMATLSASAPFPTVTLDLTQNSNPIQNPNPLQQFPRPHHAPFQVPSFFQGQQPQNFQQAAAAASLYNQSKFSGLQLSQEVGSSHLTTTQAPTQQQQQEQQQQQSSLADSVSAATAAITSDPNFTAVLAAAISSIIGGGGHGNNNSGSNNNNSRSTVSNFSGN 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03259 574 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 119 561 IPR044810 GO:0003700
Vivi4g03259 574 MobiDBLite consensus disorder prediction 551 574 - -
Vivi4g03259 574 FunFam probable WRKY transcription factor 31 293 370 - -
Vivi4g03259 574 ProSiteProfiles WRKY domain profile. 303 369 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi4g03259 574 Coils Coil 171 191 - -
Vivi4g03259 574 SUPERFAMILY WRKY DNA-binding domain 301 369 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi4g03259 574 MobiDBLite consensus disorder prediction 215 272 - -
Vivi4g03259 574 MobiDBLite consensus disorder prediction 430 455 - -
Vivi4g03259 574 Pfam WRKY DNA -binding domain 310 367 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi4g03259 574 Gene3D WRKY domain 293 370 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi4g03259 574 Coils Coil 129 163 - -
Vivi4g03259 574 MobiDBLite consensus disorder prediction 247 261 - -
Vivi4g03259 574 SMART WRKY_cls 308 368 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi4g03259 574 MobiDBLite consensus disorder prediction 494 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03259 Vivi-Chr4 147094497 147097297 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03259 1 562 WRKY Transcription Factor Family AT1G62300 48.361 1.08e-143 425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi4g03259 WRKY 6e-24 CL0274