Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03255 ATGGACAAAGGTTGGGGACTTGCTCTTGACACTTCTTCTTCCTCTCCGATTCCAATATCTCACTCTTTTTTACCTTCCAAACACACCAACACCACCAACGATAGAATGTTTCCTATTTTAGGATTCCCTGTAAACCTCACCCGCAACACCAACGCTGAAGATGGTGGTGATCGGAAAATAACCGGCGAAGTCGATTTCTTCTCTGAAAGAAACAATTCATCACCTTCAGCTTCACACGATCATCATGTGGTTAAACACAATAACATCAAAAAGGAGATCATTTCAACCGATGTAAAACCTTCCACTTCCAATATTCACGTTAATACCGGTTTACAACTTGCAAACACCGGAAGTGATCAATCTGCTGTGGATGATGGAGTTTCATCTGATGCCAAGACCATTGAGCTAGCACAGTTGCAAATGGAGCTTCAACGGATGAACTCAGAGAACAAAAAGCTGAAAGAGATGCTTAGTCATGTTACCGGTAACTACACCGCTATGCAGATGCAGCTCATGGCATTAATGCAAAAGAATCACCACGCAGAAAATGAGGTTGTTAATGCAAAAGCTGAGGATAAAAACCAAGGTGTTGGTGGAGCAATTGTACCGAGGCAGTTTCTTGAGATAGGGACTAATGGAACAGCTGAAGTTGATGATAGAGTATCAAATTCTTCATCGGATGAAAGAACACGATCGAACACGCCTCAGAATAGTCTTATTGAAGCTGGAGCTAGAGATCATAAGAGAAATAACAATGGTAAAAATGGTAGAGAAGATAGTCCTGATTCAGAATCACAAGGTTGGGGGCCTAATAAGGTTCAGAAAATACTCAACTCTTCCAATGTTGCTGAACAATCTGCTACAGAAGCTACAATGAGAAAAGCTCGTGTCTCCGTTCGCGCTAGATCAGAAGCTTCAATGATTAGTGATGGATGCCAATGGAGAAAATATGGACAGAAAATGGCGAAAGGAAATCCATGTCCTCGAGCATACTACAGATGCACTATGGCAGTTGGTTGTCCAGTTCGCAAACAAGTTCAACGTTGTGCTGAGGACAAAACAATATTGGTAACAACATACGAAGGAACACATAACCATCCACTTCCACCAGCAGCTATGGCAATGGCATCAACAACCTCAGCAGCTGCAAGCATGTTACTATCAGGTTCAATGTCAAGTGCAGATGGAATCATGACCCCAAATTTATTAGCAAGAGCTATTCTTCCTTGCTCCACAAGCATGGCAACACTTTCAGCCTCAGCACCATTCCCAACTGTTACATTGGATCTAACACAAAACTCAAACCCAATCCAAAATCCAAATCCATTGCAACAATTTCCAAGACCTCATCATGCACCATTTCAAGTCCCTAGTTTCTTTCAAGGACAACAACCTCAGAATTTTCAACAAGCAGCAGCAGCAGCATCGCTTTATAATCAATCTAAATTCTCTGGTCTTCAATTATCTCAAGAAGTTGGTTCTTCTCATTTAACAACCACACAAGCCCCAACACAACAACAACAACAGCAACAACAACAATCTTCCTTAGCAGACTCTGTCAGCGCCGCCACCGCCGCTATCACGTCCGATCCAAACTTCACCGCTGTTCTCGCCGCCGCTATCTCCTCCATCATCGGTGGTGGTGGTCATGGAAACAACAACAGCGGCAGCAACAACAACAATAGCAGAAGTACAGTTAGCAACTTTTCAGGAAACTAA 1719 0.4282 MDKGWGLALDTSSSSPIPISHSFLPSKHTNTTNDRMFPILGFPVNLTRNTNAEDGGDRKITGEVDFFSERNNSSPSASHDHHVVKHNNIKKEIISTDVKPSTSNIHVNTGLQLANTGSDQSAVDDGVSSDAKTIELAQLQMELQRMNSENKKLKEMLSHVTGNYTAMQMQLMALMQKNHHAENEVVNAKAEDKNQGVGGAIVPRQFLEIGTNGTAEVDDRVSNSSSDERTRSNTPQNSLIEAGARDHKRNNNGKNGREDSPDSESQGWGPNKVQKILNSSNVAEQSATEATMRKARVSVRARSEASMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTILVTTYEGTHNHPLPPAAMAMASTTSAAASMLLSGSMSSADGIMTPNLLARAILPCSTSMATLSASAPFPTVTLDLTQNSNPIQNPNPLQQFPRPHHAPFQVPSFFQGQQPQNFQQAAAAASLYNQSKFSGLQLSQEVGSSHLTTTQAPTQQQQQQQQQSSLADSVSAATAAITSDPNFTAVLAAAISSIIGGGGHGNNNSGSNNNNSRSTVSNFSGN 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03255 572 Gene3D WRKY domain 293 370 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi4g03255 572 Coils Coil 129 191 - -
Vivi4g03255 572 MobiDBLite consensus disorder prediction 242 261 - -
Vivi4g03255 572 MobiDBLite consensus disorder prediction 430 458 - -
Vivi4g03255 572 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 119 559 IPR044810 GO:0003700
Vivi4g03255 572 FunFam probable WRKY transcription factor 31 293 370 - -
Vivi4g03255 572 ProSiteProfiles WRKY domain profile. 303 369 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi4g03255 572 Pfam WRKY DNA -binding domain 310 367 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi4g03255 572 SUPERFAMILY WRKY DNA-binding domain 301 369 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi4g03255 572 MobiDBLite consensus disorder prediction 212 272 - -
Vivi4g03255 572 MobiDBLite consensus disorder prediction 494 515 - -
Vivi4g03255 572 MobiDBLite consensus disorder prediction 549 572 - -
Vivi4g03255 572 SMART WRKY_cls 308 368 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03255 Vivi-Chr4 146959494 146962238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03255 1 560 WRKY Transcription Factor Family AT1G62300 48.684 4.87e-146 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi4g03255 WRKY 6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03255 - - gmx:100802124 674.855