Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03241 ATGTCTTATACCCCTTTTTTCATTCTAGCTTTCTTCTCTTTGATCCTCTCTTCTCTTCATCTTTCATTTGCCAATACTGACTCTACTGATGTTCAAGCTCTTGAGGTTATGTACAATGCGTTGAATAATCCAACTGAATTAACGGGTTGGAAAATTGGCGGCGGCGATCCATGTGGAGATTCATGGAAAGGGATTACTTGTGACGGTTCAGCTGTTGATTCAATTGATCTCTCTGGTTTAGGACTCCATGGAACTCTTGGATATTTGCTTTCAGACCTTATGTCACTGAAAAAGCTTGACTTGAGTGGTAACAAGATCCATGATACAATTCCCTATCAATTGCCACCAAATCTTACAAGCCTAAATCTAGCAGGAAATAACTTAACGGGAAATCTTCCTTATTCCTTTTCTGCCATGGTTTCACTCACTTATCTGAATGTGAGCAATAACGCACTCTCTCTGTCAATTGGTGACTTTTTTGCTAATCATTCCCGTCTTGATACCGTGGATCTATCATTCAATAACTTTTCCGGGGATCTTCCACCTTCATTTGAGTCACTTACAAATCTCTCTTCTCTTTTCTTGCAGAACAACCGATTGACCGGCTCTCTCACTGTTCTTGCTGGTTTGCCTTTGGATACTTTAAATATTGCAAACAATAATTTCAGTGGATGGATACCTCACGAGCTTAAATCTATCAATAATTTCATATATGATGGAAACTCTTTTGATGACGGCCCTGCACCTCCTTCGCCAGAATCAACTTCGCCAGAATCTACTTCTCCCCCACCTAGTGAACCTCATAAAAGTAATCATCACCCCAGGTCTGGTTCACATACTAAAACACAGGGTTCTAATTCTGATGACCATAAGGGAACGTCAGTGGGGGCCATTGTAGGAATTGTTTTAGGTTCAGTGTTGGCGTGTTCTATTCTGCTAGTTGCTCTTGTTTTCTGTATTCGAAAAATAAAAGGGAAGGAAAAAGGTCCAAGAACTTCTAATGGAAGCCTTCCTCCTGGAGGAATCGTTAACGTAACTCCTCAGATGCAGGAGCAGAGGGTGAAAAGTGCTTCTGTGATTACAGATCTCAAACCTCGTCCTCCGTCAGAAAATGTGACGATGGATAGAATGCCTGTAAAAAGTGGATCTGTAAGGCAGATGAGGTCTCCGATAACTTCCACTTCTTACACAGTTGCTTCCCTCCAGAGTGCAACAAATAGCTTCAGTCAAGAATTCATTATTGGTGAAGGTTCTCTTGGTCGAGTATACCGGGCTGAATTCCCAAATGGGAAGATAATGGCCGTTAAGAAGATTGACAACGCGGCACTGTCCTTACAAGAGGAAGATAATTTTCTTGAAGCTATTTCAAATATGTCTCGTTTGCGGCATCCAAATGTTGTTACACTGGCTGGATACTGTGCAGAACACGGCCAACGGCTTCTAATTTATGAACATATTGGAAATGGAAATCTGCACGACATGCTCCATTTTGCTGAAGATAGCAGTAAAGCTTTACCTTGGAATGCCCGCGTGCGCATAGCTCTTGGCACAGCCCGGGCCTTAGAGTATTTGCACGAAGTTTGCTTGCCCTCGGTTGTACATAGAAATTTCAAATCAGCAAATATATTACTCGATGAAGAGCTCAATCCTCACCTTTCTGACTGTGGCTTAGCCGCTCTGACACCAAACACTGAGCGACAGGTATCATCAACTCAAATGGTTGGTTCATTCGGTTATAGCGCTCCTGAATTTGCATTATCAGGAGTATACACTGTAAAAAGCGATGTTTACAGTTTTGGCGTGGTTATGCTTGAACTTCTAACTGGTCGGAAGCCACTTGACAGTTCAAGAGCAAGAGCTGAACAGTCGCTCGTGAGGTGGGCTACGCCGCAACTCCATGATATCGACGCCTTGTCAAAAATGGTTGATTCCTGTTTGAATGGCATGTATCCTGCAAAATCTCTTTCACGCTTCGCCGATATCATCGCCCTCTGTGTTCAGCCGGAACCGGAATTTCGACCGCCAATGTCTGAGGTGGTGCAAGCATTGGTCCGGTTAGTGCAAAGAGCAAGTGTGGTTAAAAGGAGACCAAGTGAAGAATCTGGTTTCGGTTACAAGACACCAGATCATGAGGGCATAGACATATCATTTTAA 2154 0.4299 MSYTPFFILAFFSLILSSLHLSFANTDSTDVQALEVMYNALNNPTELTGWKIGGGDPCGDSWKGITCDGSAVDSIDLSGLGLHGTLGYLLSDLMSLKKLDLSGNKIHDTIPYQLPPNLTSLNLAGNNLTGNLPYSFSAMVSLTYLNVSNNALSLSIGDFFANHSRLDTVDLSFNNFSGDLPPSFESLTNLSSLFLQNNRLTGSLTVLAGLPLDTLNIANNNFSGWIPHELKSINNFIYDGNSFDDGPAPPSPESTSPESTSPPPSEPHKSNHHPRSGSHTKTQGSNSDDHKGTSVGAIVGIVLGSVLACSILLVALVFCIRKIKGKEKGPRTSNGSLPPGGIVNVTPQMQEQRVKSASVITDLKPRPPSENVTMDRMPVKSGSVRQMRSPITSTSYTVASLQSATNSFSQEFIIGEGSLGRVYRAEFPNGKIMAVKKIDNAALSLQEEDNFLEAISNMSRLRHPNVVTLAGYCAEHGQRLLIYEHIGNGNLHDMLHFAEDSSKALPWNARVRIALGTARALEYLHEVCLPSVVHRNFKSANILLDEELNPHLSDCGLAALTPNTERQVSSTQMVGSFGYSAPEFALSGVYTVKSDVYSFGVVMLELLTGRKPLDSSRARAEQSLVRWATPQLHDIDALSKMVDSCLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVKRRPSEESGFGYKTPDHEGIDISF 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03241 717 SUPERFAMILY Protein kinase-like (PK-like) 385 683 IPR011009 -
Vivi4g03241 717 ProSiteProfiles Protein kinase domain profile. 408 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g03241 717 MobiDBLite consensus disorder prediction 241 291 - -
Vivi4g03241 717 Pfam Leucine rich repeat 95 152 IPR001611 GO:0005515
Vivi4g03241 717 MobiDBLite consensus disorder prediction 277 291 - -
Vivi4g03241 717 Pfam Protein tyrosine and serine/threonine kinase 413 683 IPR001245 GO:0004672|GO:0006468
Vivi4g03241 717 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 27 254 - -
Vivi4g03241 717 Gene3D Phosphorylase Kinase; domain 1 371 485 - -
Vivi4g03241 717 ProSiteProfiles Leucine-rich repeat profile. 189 211 IPR001611 GO:0005515
Vivi4g03241 717 Pfam Leucine rich repeat N-terminal domain 28 68 IPR013210 -
Vivi4g03241 717 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 486 697 - -
Vivi4g03241 717 Gene3D Ribonuclease Inhibitor 27 256 IPR032675 -
Vivi4g03241 717 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 373 485 - -
Vivi4g03241 717 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 17 688 IPR046959 -
Vivi4g03241 717 MobiDBLite consensus disorder prediction 250 264 - -
Vivi4g03241 717 CDD STKc_IRAK 414 686 - -
Vivi4g03241 717 ProSiteProfiles Leucine-rich repeat profile. 95 116 IPR001611 GO:0005515
Vivi4g03241 717 MobiDBLite consensus disorder prediction 362 386 - -
Vivi4g03241 717 Gene3D Transferase(Phosphotransferase) domain 1 486 704 - -
Vivi4g03241 717 SUPERFAMILY L domain-like 29 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03241 Vivi-Chr4 146735800 146740447 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03241 139 717 Strubbelig Receptor Gene Family AT4G22130 70.345 0.0 807
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Vivi4g03241 PK_Tyr_Ser-Thr 1.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03241 - - gmx:100803711 1113.21