Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03231 ATGTCTCGCCCAATTGAGCCATTGAAAGAGATCAATGATTCCAAAGATTTGTGGAAGATCGCAGTTAGATGCAAACATCTATGGACTGTCACAAGTTATTCAAACAAAGAACACATGGAGATGGTTTTGGTTGATTCTAAGCGTGATATGATTCAGGCTGTTGTCCCTGCTTATTTGCTTTCGAAATTCAAATATGAAATTGAAACAGGAAACTCTTATATCATGCAAAATTTTAAAGTTGGGAAGAATGATTTTGCTTTTAAGTCGACAAATCATACATACAAATTGGTTTTTTGTGGGTCAACTTCTGTTAAGAAAGCAGAATTTCCTGACATCCCTCATAACTACCTTAACATTATTGGTTTGAATTTCATAGTTGAAGGAAGGTTTCAATCAAATGTTTTGGTTGATTTGATTGGAGGAATCACTGATATCACTCAAACCCAAGTTAACAGTGACAACAGCAAGAACAGAATAGTTTTTTCAATTGTAGATGCCAGCAAAACAGTTGTACAATGTACTCTTTGGGGGCAACTTGCAGTTCAGCTATGTGAGTATTATAAGAATAATAAGCAAGCCTCTGATGTTGTCATTGTGCTAATCAATGCAAGGGTTAAAGAGGCTCAAGGAGGATTTCCAGTTAGTGTTTCCAACACATGGAATGGAACGAAATTGTTGATTAATGACCTTGCTATTGAGGAAGTCAAGAATCTAAAAGAAAGGTACTAA 729 0.3567 MSRPIEPLKEINDSKDLWKIAVRCKHLWTVTSYSNKEHMEMVLVDSKRDMIQAVVPAYLLSKFKYEIETGNSYIMQNFKVGKNDFAFKSTNHTYKLVFCGSTSVKKAEFPDIPHNYLNIIGLNFIVEGRFQSNVLVDLIGGITDITQTQVNSDNSKNRIVFSIVDASKTVVQCTLWGQLAVQLCEYYKNNKQASDVVIVLINARVKEAQGGFPVSVSNTWNGTKLLINDLAIEEVKNLKERY 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03231 242 SUPERFAMILY Nucleic acid-binding proteins 130 242 IPR012340 -
Vivi4g03231 242 Gene3D - 2 107 IPR012340 -
Vivi4g03231 242 Gene3D - 110 242 IPR012340 -
Vivi4g03231 242 CDD RPA1_DBD_B_like 137 242 - -
Vivi4g03231 242 SUPERFAMILY Nucleic acid-binding proteins 4 108 IPR012340 -
Vivi4g03231 242 Pfam Domain of unknown function DUF223 40 135 IPR003871 -
Vivi4g03231 242 CDD RPA1_DBD_A_like 19 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03231 Vivi-Chr4 146370221 146371211 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03231 1 183 Core DNA Replication Machinery Family AT5G08020 22.959 3.63e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03231 - - vvo:131614721 452.595