Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03217 ATGGCGACTATTGTGAGAGGAACACTCGTTTCAAATTCTGTGAAGTTGTTGTTAGAAAAGCTTGCTTCTACTGAGTTTGTGGACAACTTCCGGAGCACAAAGCTTGATGTTTCATACTTGAAAAAGCTGAAGACAACCCTGACATGGGTTCAAGATTTACTCAATGATGTCGAAGAACAACACTTCACCAATCCGGATATCAAGAACTGGTTGAATACGCTGAGATATGATGTTTTTGAACTTGCCAATTTGTTTGACGAAATCAACACCGAGGCATTGCGGCGCAAAGCGGAAGCAGAGTATGAAACCCCAACTGCTTCCTCCCTAGTATTGAAAACTATTTTTTCTCCTTTCAAACGGAGTAGTAGTGTGATTAATTTTAAAATGCAAAAATTTATTGAAAGATTAGAATGGTCGAATTCAGCATTACAACAAGGCGGGTTAGCTGTTTTCCATTCTAGCAGTTTTTCTCAAGAAATTCCCACAAGCTCTATTTTAGTTGATGAATCTTCTATTTATGGAAGAGACTGTGATAAAATCAAACTAAAAAATCTTTTGTTGTCTAGTAGTGATGGTGATGGTAAAATAAGAATCATTTCCATTGTTGGTATGGGAGGGATTGGTAAAACAACCCTTGCTAAACTCCTTTACAATGACCCTCTAGTAAAGGAAAAATTTGAGTTAAGAGTGTGGGCATATATCTCGAAAGATTTTGATGTCTTCAGAGTTCTTGTTACCATTCTTGAATCCATCTCTTCACAATCAATCAATAGCGATAACGCGGATTGTCAACCTCTTGAATCTTTAGATACAAAAGCAAATGACAACAGTGAAGCAAAGACCATTTACCAGAATATTCTATTAGTGAAGCTGCAACAAATTTTAAGCACTAAAAAGTTTTTATTGGTATTGGATGACGTGTTGGATGCAAAATCTGTCCATTGGATATATCTGATGGACATCTTTAATGTGGGGAAAACAGGAAGTAGGATCGTCATCACAACAAGAGATGAAAGAGTTGCACTATCCATGCAGACATTTGTTTTTGTTCATTATTTGAGACCTCTGGAAAGTAAAGATTGCTGGTCTATAGTTACCACACTTGCATTTGGAGCAGACTATCAACAACAAATGGATGAATTTGACAGGAAAATAGCAAAAAAATGTGATGGAGTACCACTAGCTGCAGTAGTACTTGGCAGAGCTCTTTTTCACGCCAAATTTGCTCCAAATGATGAGTGGGATTTTGTGCTAGGAAGTAACATTTGGGAGTTGGGAGATTATAAGTTAAAAGCTGCTTTACATTCGAGCTACCATTATCTTTCGGATCCTTTAAAACTGTGCTTTGCATATTGTTCAATTTTTCCAAAGAAGTCCATCTTAGAAAAAAGGAAGGTAGTTCAATTGTGGGTTGCAGAAGGCATAGTCAAATTTTCCACAGGTCAAGAAAGCTGGAAAAAAGTTGGAGAAGAATACTTTGATGAGCTAGTTTCAAGGTCATTGATACATCAACGATCTATTGATGATGAGGAAGTAAGCTTTGAAATGAATAACCTCATTCATGATTTAGCTACAATGGTTTCATTTCCATATTGCATCAGGTTTGACGATCAAATCTTACATGAAAGGGTGCATTATTTGTCATACAATAGAGAGTTATATGACTCATTTTATAAATTTGATAAATTGTATGGATTAAAAGATTTGCGAACCTTTCTAGCATTGCCACTACAAGAACGATTGCCTCTTTGTTTGCTATCGAACAAGGTAGTACATGACTTGCTGCCAACGATGAAAGAATTACGCATATTGTCTTTGTCAAACTACAGGAGTATCAACGAGGTTCCCAACTCTATTGGAAATTTGTTATACCTGCGGTACTTAAATCTTTCTTACACTATGATTGAAAGGTTGCCATCAGCAACATGCCAGCTTTACAATCTGCAATTCTTATTGGTGTCAGGCTGTAAAAGGCTCACTGAATTGCCAGAGGACATGGGAAAATTGGTTAATCTACGCCACCTTGACGTCAGTGGCACTGCATTGAGGGAGATGCCCGGACAAATTGCCAAACTAGAAAATCTCCAAACTTTATCTGACTTTGTTGTTAGCAAACATAATGGTGGATTGAAGGTTGCAGAGCTAGGAAAATTTCCCCACCTACAGGGAAAACTTTCCATCTCACAACTACAAAATGTTAATGACCCCTTTGAAGCTTCTCTAGCCAATATGATGACGAAAGAACAAATAGACGAGTTAGCTTTAGAATGGGACTGTGGTAGTGCTTTTTCAGATTCACAAGTTCAAATTGTTGTACTTGAATATTTGCAACCCTCTACAAAATTGAAAAGTCTCACCATCAAAGGCTATGGTGGAATCAGCTTTCCAAATTGGTTGGGTGATTCTTTATTTAGAAACATGGTTTATTTAAGGATCTCAAATTGTGATGATTGTTTATGGCTTCCACCCCTTGGACAATTGAGTAATCTGAAAGAACTCGTTATTAAAGGGATGCATTCAGTAGAGACAATTGGAATTGAGTTCTATGGAACTGATGGTTCTTCATTTCAACCATTTCCCTCCTTGGAGATTCTACACTTTGAGGATATGCAAGAGTGGGAGGAATGGAACTCGATTGGAGGTATGGCTACAGAGTTTCCTTCTCTAATAACTTTGTCACTAATTAAATGCCCGAAACTTAGAGTAGGAAACATAGCTGACACATTTCCTTCCTTAACTGAACTTGAGTTAAGAGAATGTCCTCTATTGGTGCAATTAATGCCATCGTCAGATCATGTATTCGGGCAACTGGCGTTCCCTCTTAATTCTCTTCGAAAGTTGACCATAGATGGATTTTCTTTTCCGATGTCATTCTCAACCGACAACCTACCAAAAACCTTGAAATTTCTCATAATCAGTAACTGTGAAAATCTAGAGTTCCCTCTATGTGAATACTTGGACAATTACACATCACTTGAGGAATTGAAAATATCTTATAGCTGTAATTCAATGATATCATTTACCTTGGGTGTTCTCCCTGTCCTCAAAAGTCTGTTTATTGAGGGTTGTAAAAATTTGAAATCAATATTAATTGCAGAAGATGCATCTCATAAGAGTCTCTCATTTCTTAGAAGCATCAAAATATGGGATTGTAATGAATTAGAGTCATTTCCCCCCGGTGGATTGGCCACTCCAAACCTCATTTATTTTGCAGTGTGGAAGTGTGAGAAGCTTTCTTCACTACCAGAAGCAATGCACAATCTAACTGCCCTTCAAGAAATAGAAATTGATAATCTACCAAATCTTCGATCTTTTGTCATAAATAATTTGCCTATTAGTTTGAAGGAGCTGACTGTTGGCTTTGTTGGAGAGATTATGTGGAATACTGACCCAACTTGGGAACATCTCACTTGTCTCTCAGTGTTGCGAATTAACAGCAATGATACGGTGAACGCGCTGATGGGGCCATTGCTACCCACTTCTCTTGTGAAACTATGCATATGTGGTCTAAACACTACAAGAATTGATGGGAAGTGGCTTCAAAATCTGACTTCTCTCCAAAACCTTGAGATTGTGAACGCTCTCAAACTCAAGTCGTTGCCAAAGAAAGGATTTCCTTCCTCTCTTTCAGTATTTAGTGTGACTCGCTGTCCATTACTGGAGGCAAGTTTGCGGAAAAAGCGGGGGAGAGAGTGGCTTAAGATCGCTCACATTCCCTCCATAATTATTGATGACGAATTGATCACATGA 3750 0.3795 MATIVRGTLVSNSVKLLLEKLASTEFVDNFRSTKLDVSYLKKLKTTLTWVQDLLNDVEEQHFTNPDIKNWLNTLRYDVFELANLFDEINTEALRRKAEAEYETPTASSLVLKTIFSPFKRSSSVINFKMQKFIERLEWSNSALQQGGLAVFHSSSFSQEIPTSSILVDESSIYGRDCDKIKLKNLLLSSSDGDGKIRIISIVGMGGIGKTTLAKLLYNDPLVKEKFELRVWAYISKDFDVFRVLVTILESISSQSINSDNADCQPLESLDTKANDNSEAKTIYQNILLVKLQQILSTKKFLLVLDDVLDAKSVHWIYLMDIFNVGKTGSRIVITTRDERVALSMQTFVFVHYLRPLESKDCWSIVTTLAFGADYQQQMDEFDRKIAKKCDGVPLAAVVLGRALFHAKFAPNDEWDFVLGSNIWELGDYKLKAALHSSYHYLSDPLKLCFAYCSIFPKKSILEKRKVVQLWVAEGIVKFSTGQESWKKVGEEYFDELVSRSLIHQRSIDDEEVSFEMNNLIHDLATMVSFPYCIRFDDQILHERVHYLSYNRELYDSFYKFDKLYGLKDLRTFLALPLQERLPLCLLSNKVVHDLLPTMKELRILSLSNYRSINEVPNSIGNLLYLRYLNLSYTMIERLPSATCQLYNLQFLLVSGCKRLTELPEDMGKLVNLRHLDVSGTALREMPGQIAKLENLQTLSDFVVSKHNGGLKVAELGKFPHLQGKLSISQLQNVNDPFEASLANMMTKEQIDELALEWDCGSAFSDSQVQIVVLEYLQPSTKLKSLTIKGYGGISFPNWLGDSLFRNMVYLRISNCDDCLWLPPLGQLSNLKELVIKGMHSVETIGIEFYGTDGSSFQPFPSLEILHFEDMQEWEEWNSIGGMATEFPSLITLSLIKCPKLRVGNIADTFPSLTELELRECPLLVQLMPSSDHVFGQLAFPLNSLRKLTIDGFSFPMSFSTDNLPKTLKFLIISNCENLEFPLCEYLDNYTSLEELKISYSCNSMISFTLGVLPVLKSLFIEGCKNLKSILIAEDASHKSLSFLRSIKIWDCNELESFPPGGLATPNLIYFAVWKCEKLSSLPEAMHNLTALQEIEIDNLPNLRSFVINNLPISLKELTVGFVGEIMWNTDPTWEHLTCLSVLRINSNDTVNALMGPLLPTSLVKLCICGLNTTRIDGKWLQNLTSLQNLEIVNALKLKSLPKKGFPSSLSVFSVTRCPLLEASLRKKRGREWLKIAHIPSIIIDDELIT 1249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03217 1249 Gene3D - 356 436 IPR042197 -
Vivi4g03217 1249 SUPERFAMILY L domain-like 940 1235 - -
Vivi4g03217 1249 Gene3D Ribonuclease Inhibitor 577 939 IPR032675 -
Vivi4g03217 1249 FunFam Probable disease resistance protein At1g63360 438 526 - -
Vivi4g03217 1249 Gene3D Ribonuclease Inhibitor 941 1121 IPR032675 -
Vivi4g03217 1249 Gene3D - 13 127 - -
Vivi4g03217 1249 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 452 IPR027417 -
Vivi4g03217 1249 PANTHER DISEASE RESISTANCE PROTEIN RP 40 889 IPR044974 GO:0006952
Vivi4g03217 1249 Gene3D - 437 526 IPR036388 -
Vivi4g03217 1249 Gene3D Ribonuclease Inhibitor 1122 1242 IPR032675 -
Vivi4g03217 1249 PRINTS Disease resistance protein signature 596 612 - -
Vivi4g03217 1249 PRINTS Disease resistance protein signature 389 403 - -
Vivi4g03217 1249 PRINTS Disease resistance protein signature 198 213 - -
Vivi4g03217 1249 Pfam NB-ARC domain 184 417 IPR002182 GO:0043531
Vivi4g03217 1249 SUPERFAMILY L domain-like 536 977 - -
Vivi4g03217 1249 Gene3D - 154 349 IPR027417 -
Vivi4g03217 1249 Pfam Rx N-terminal domain 10 99 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03217 Vivi-Chr4 145901345 145907825 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03217 196 696 WRKY Transcription Factor Family AT5G45050 24.689 3.34e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03217 - - tpra:123913254 1563.9