Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03175 ATGACTCATTTACCCTCGAAAAACCTATGGATTCGGAAGCAACAATGTCCTTGTGGAGATTGGAAGTGTTACATTACACATGAAGGTGTTTCTACAGAGGATTCCACAACACCAGAATCAGTGAAACCTGATAAAACATCTTGTATAGCTATCATTACCCCTTATGTTGGAATGGTGTTTAGGACTGATGATGAAGCTTTTGAATATTACGGTAATTTCGCTAGGAAGAATGGGTTCTCTATTAGAAAAGAAAGATCTAGAATTAGCCCGCAGTTAGGTGTTTACAAGCGCGACTTTGTTTGTTACCGATCCGGGTTTGCACCGGTGAAGAAGAAGGCGAACGGTGAGCATCATAGAGATAGGAAATCGGTGAGGTGTGGATGTGATGCGAAAATGTATCTGTCTAAGGAGGTTATGGATGGTGGTGTTTGCCAATGGGTTGTTGTGCAGTTTAGTAATGTACATAATCATGAGCTTTTGGAAGATGATCAGGTGCGGCTTTTACCTGCGTATCGGAAGATTCATGAGGCTGATCAGGAGCGGATATTGTTGCTTTCGAAAGCGGGGTTTCCGATACATCGGATAGTGAAGATGCTTGAGCTGGAGAAGGGGATTCAAGGTGGGCATTTGCCGTTCTTGGAAAGGGATGTGAGGAACTTTGTGCAGAATCGCAAGAAGGTTGTTCAAGAGAATGAGGCGTTGTTAAGTGAGAAACGAGAAAATGATGTTTTGGAGCTTCTTGAGGTGTGTAAAGCTGTGAAAGAAACTGATGTTGAGTTTGTTTATGATTTTACTGTCGATAAGAATGAGAAAGTTGAAAATATAGCTTGGTCGTATGGTGATTCTATTAATGCGAATGCTTTGTTTGGTGATGTGATTTATTTTGACATTTCTTATCGATCTGCTGCTTACGGATTGCATTTTGGAGTGTGGTTTGGTATTGATAATTGCGGTAGAATAATTTTGTTCGGTTGTGTTTTACTCCAAGAAGAAACACCGCAATCGTTCTCATGGGCGTTACAGACTTTTCTCCGGTTCATGAGAGGAAGATGTCCGCAAACCATTATATCCGATCTTGACCCTTGTCTTGGGGATGCAATTAGAAGCGAATTTCAAGGAACTAAACATGTCATACCACTATGGAATATTTTGAATAAGGTACATAGTTGGTTTTCTATTCCTCTTGGATCTCGCATTGAAGAATTTCAATCAGAGTTCAATGCCTTATTTCAAATTGAGAATACCGAAGAATTTGAACTCCAATGGAGCCAAATGATTTCTATGTTTGAACTTGGTTCAGATAAACATATCGATTTACTGTATTCGGTTCGAGCTTCCTGGGCACAGTCGTATGTAAGAGGTTATTTTTTGGCTCAAATGGCGACAACAGCGTATTCCAAGTCTATAGACGCGTTTTTTGAAGGGATCTTCACTGAACATACATGTTTGCGTAGCTTTTTTGAACAGATTGGTATTTCTGCGAATTTTCGTCATCAATCACATGACGAGACTCAATATACAAATCTTAGAACCTACATACCTATCGAAGAGCATGCGCGAAGCATCCTCACACCTTATGCTTTCAATTCTTTACAACAAGAGTTATTGTTGGCAATGCAATACTCTACATCTGAAATGGCCAATGGATCATATGTTATACGACACTTCAAAAGGTTGGATGGAGATCGGTTCGTGATATGGTTGGCGGAAGAAGAACAGATACACTGCTCTTGCAAAGAATTTGAATCGTCAGGGATATTATGCAGACACGCTCTTCATGTACTAATAATAAAGAATTACTTTCATCTTCCTGACAAATACTATTTAAGTAGATGGCGTCGGGAATGTTCTTTGCCCGTCGAGGATGAGCATAACAACAACCAAAGTATTATTGGTAGGGAATGGTTTCAAGAATATCAATCTCTAGTTGAAACTTTGTTGTCGGAATCATCCGTTACAAAGGAGCGGTCTGACTATGTTCGCAAAGAACTGACAAAAGAACTTAATAGGATTCTTAACGAGGTTAGAAATCTGCCTGAGACTGACGATGTTTGCAGCATGAACGTGTCGGTTTCGCCAAATGGCCAAGTTTGA 2094 0.4007 MTHLPSKNLWIRKQQCPCGDWKCYITHEGVSTEDSTTPESVKPDKTSCIAIITPYVGMVFRTDDEAFEYYGNFARKNGFSIRKERSRISPQLGVYKRDFVCYRSGFAPVKKKANGEHHRDRKSVRCGCDAKMYLSKEVMDGGVCQWVVVQFSNVHNHELLEDDQVRLLPAYRKIHEADQERILLLSKAGFPIHRIVKMLELEKGIQGGHLPFLERDVRNFVQNRKKVVQENEALLSEKRENDVLELLEVCKAVKETDVEFVYDFTVDKNEKVENIAWSYGDSINANALFGDVIYFDISYRSAAYGLHFGVWFGIDNCGRIILFGCVLLQEETPQSFSWALQTFLRFMRGRCPQTIISDLDPCLGDAIRSEFQGTKHVIPLWNILNKVHSWFSIPLGSRIEEFQSEFNALFQIENTEEFELQWSQMISMFELGSDKHIDLLYSVRASWAQSYVRGYFLAQMATTAYSKSIDAFFEGIFTEHTCLRSFFEQIGISANFRHQSHDETQYTNLRTYIPIEEHARSILTPYAFNSLQQELLLAMQYSTSEMANGSYVIRHFKRLDGDRFVIWLAEEEQIHCSCKEFESSGILCRHALHVLIIKNYFHLPDKYYLSRWRRECSLPVEDEHNNNQSIIGREWFQEYQSLVETLLSESSVTKERSDYVRKELTKELNRILNEVRNLPETDDVCSMNVSVSPNGQV 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03175 697 Pfam MULE transposase domain 292 385 IPR018289 -
Vivi4g03175 697 Pfam FAR1 DNA-binding domain 68 160 IPR004330 -
Vivi4g03175 697 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 51 669 IPR031052 GO:0006355
Vivi4g03175 697 Pfam SWIM zinc finger 565 596 IPR007527 GO:0008270
Vivi4g03175 697 ProSiteProfiles Zinc finger SWIM-type profile. 564 599 IPR007527 GO:0008270
Vivi4g03175 697 SMART 26again6 574 601 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03175 Vivi-Chr4 144367814 144370586 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi4g03175 MULE 2.1e-12 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03175 - - gmx:100817107 1164.83