Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03146 ATGGATCCTAATCATTTTCATTATCAACAAGCTATGTTCAATTTCATGCAAAATTATCAAAATCCTAATCCTCAAAATTCTCAAATTCCACCGATGCCACCATTTTCTACTCAAGTTCCACCATTTTCTACTCAAGTTCCACCATTTTCTACTCAAGTTCCACCATTTTCTACTCAAGTTGGTACTGAAAATGAAGAAAGGGTTGTTGTTAAAAAAAAATCTCGAGAGCAATTTACAAGGGATGAAGATATACTACTTATCCAATCATGGCTCAATGTTTCAAAGGATCCAATTGTGGGAGTTGATCAAAAGGCTGAGAGTTTTTGGGTAAGAGTCGCTGCCAATTATAACCAGTATCGTGGGGAATCGCGGGAAAAGTTAAAGGGACAATTAAAATGTCGATGGCATCGAATAAATGGCTTGGTTCAAAAATTTGTTGGGTGTTACAAACAAGCTGTTAATGGAAAGAAAAGTGGGACATCGGAGAACGATGTCATGGCCGCTGCAAATGCATTTTTTGCTCAGGATCAAGGTACAACATTCAACCTTGAGTACGCATGGAGATTGTTAAAAGATGAACCTAAATGGATGGGAGAATCGATTGAAAGTTCTTCAAAAATAACAAAGACTTATGCTAGTGAGGCATCATCGGAGAACCCAAATACACCTTCAAGTTATGAGTTTAACTCATCATCACCAATGGAGCGTCCAATGGGACAAAAAGCAGCAAAAAGGAAGGGTAAGGCAAAGGAAATTCTAAATGAAACGCAAGATGCAAGGAATAAAAGAGCAATGTTAATGGAAAGACTAGCGCAAAGTAAGGAGGACGAGATAGAATTAAAGGTAGTGCAACTAATGATGAAAGACACTTCTACTATGAGCGATAGTCAACGAGATATTCATGAAAAATATTGTAATAAGATGAAAAAAAATATGGAATGTAGTTAG 948 0.3692 MDPNHFHYQQAMFNFMQNYQNPNPQNSQIPPMPPFSTQVPPFSTQVPPFSTQVPPFSTQVGTENEERVVVKKKSREQFTRDEDILLIQSWLNVSKDPIVGVDQKAESFWVRVAANYNQYRGESREKLKGQLKCRWHRINGLVQKFVGCYKQAVNGKKSGTSENDVMAAANAFFAQDQGTTFNLEYAWRLLKDEPKWMGESIESSSKITKTYASEASSENPNTPSSYEFNSSSPMERPMGQKAAKRKGKAKEILNETQDARNKRAMLMERLAQSKEDEIELKVVQLMMKDTSTMSDSQRDIHEKYCNKMKKNMECS 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03146 315 MobiDBLite consensus disorder prediction 211 250 - -
Vivi4g03146 315 Pfam No apical meristem-associated C-terminal domain 180 299 IPR029466 -
Vivi4g03146 315 Coils Coil 249 276 - -
Vivi4g03146 315 PANTHER - 63 310 - -
Vivi4g03146 315 MobiDBLite consensus disorder prediction 211 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03146 Vivi-Chr4 143788520 143789467 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03146 47 262 Glutathione S-transferase Gene Family AT5G41240 33.051 1.64e-25 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03146 - - vvo:131635631 513.842