Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03103 ATGTATCCTAGATTGATACACCCCCATGATGGAATTGTTGGACAAGATGATCTGCAATCTGGTGTTGCTGCTGTCAATCATAAGGGTGATCCTTGTCTTGTTTTGACTGCTGATCCAAAGCCTCGTCTTCGCTGGACTCAAGACCTCCATGAGCGGTTTGTTGATGCTGTTACTCAGCTTGGAGGTCCCAGTAAAGCTACGCCAAAAGCAATCATGCGGACAATGAACGTCAAGGGTTTAACTCTATTTCATTTAAAGAGTCATCTTCAGAAATACAGACTTGGGATGACAGGTTCCTATCTTTTAGAAAGCCCTGGCACTGATAACTCATCTCCAAAGTTACCTACATCCGATACAAACGAGGGTTACGAAATCAAGGAGGCGTTAAGAGCACAGATGGAAGTGCAAAGTAAATTACATTTGCAAGTGGAGGCAGAGAAGCACTTGCAAATCCGTCAGGACGCAGAGCGAAGATACATGGCTATGCTTGAAAGAGCTTGCAAGATGCTGGCTGATCAATTTATAGGTGCTTCTGTTATAGACACAGACAACCAAAAGTTCCAAGGAATTGAAAATAAAGCACCAAGAGCTCCCTTGGTTGACCCTCTTGGCTTTTATTCCTTGCCGTCTACTGAGACAGCCGGAGTGAATGTTCCTGAAGAAGAAATTCCTCCAACCATCCCACCCCAAAGAGCCGATTGCTCAACCGAAAGTTGTTTAACATCGCACGAGAGCTCTGGAGGATTGACTCTAGAAGGATCTCCAGGTGCGGGGAAAAGAAGAATGCTAGGCATGGAGTCAATGGCGGCGCCTTTGATTTGGAGTGAAGCAAAGATGAAAGCTCAAGCCATCAATATAGGTCAAGGTAATCATCATCTTGGAATAACTAGGTATGGCATGTAA 903 0.4474 MYPRLIHPHDGIVGQDDLQSGVAAVNHKGDPCLVLTADPKPRLRWTQDLHERFVDAVTQLGGPSKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGMTGSYLLESPGTDNSSPKLPTSDTNEGYEIKEALRAQMEVQSKLHLQVEAEKHLQIRQDAERRYMAMLERACKMLADQFIGASVIDTDNQKFQGIENKAPRAPLVDPLGFYSLPSTETAGVNVPEEEIPPTIPPQRADCSTESCLTSHESSGGLTLEGSPGAGKRRMLGMESMAAPLIWSEAKMKAQAINIGQGNHHLGITRYGM 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03103 300 MobiDBLite consensus disorder prediction 231 249 - -
Vivi4g03103 300 Gene3D - 39 96 - -
Vivi4g03103 300 FunFam Myb family transcription factor 39 97 - -
Vivi4g03103 300 Pfam Myb-like DNA-binding domain 43 93 IPR001005 -
Vivi4g03103 300 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 24 250 IPR044848 GO:0003700
Vivi4g03103 300 MobiDBLite consensus disorder prediction 221 259 - -
Vivi4g03103 300 Pfam MYB-CC type transfactor, LHEQLE motif 124 169 IPR025756 -
Vivi4g03103 300 SUPERFAMILY Homeodomain-like 40 96 IPR009057 -
Vivi4g03103 300 NCBIfam myb-like DNA-binding domain, SHAQKYF class 40 94 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03103 Vivi-Chr4 142944818 142948324 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03103 8 242 G2-like Transcription Factor Family AT3G24120 43.243 8.67e-58 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Vivi4g03103 Myb_DNA-binding 3e-06 CL0123