Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03090 ATGGGCTCGGAGAATGAAATTTCTCCGGCCGATGCTCGTAAGGCTCCCGGCAAGGAACAACAAGCCGCCGGCGTCGGAATTCTTCTTCAGATCATGATGTTGGTCTTGTCCTTCGTTCTCGGTCACGTTCTCCGTCGTAAGAAGATTTACATCATTCCTGAAGCCAGTGCTTCTCTTCTCATAGGGTTAATTGTTGGTGTTTTAGCTAACATTTCAGATACTGAAACTAATATCAGGGCTTGGTTCAATTTTCATGAGGAGTTTTTTTTCCTGTTCCTGTTACCTCCGATCATATTTCAGTCTGGTTTCAGTCTTGCACCTAAACCATTTTTCTCAAATTTTGGTGCAATTGTGACATTTGCTATATTTGGTACCTTTCTTGCTTCAGTTGTGACGGGTGTCTTGGTTTATCTTGGTGGGTTGCTCTTCCTTATGTATAAACTACCTTTTGTTGAGTGCCTGATGTTTGGCGCCCTTATATCGGCAACCGATCCTGTTACGGTTTTGTCCATATTTCAGGAGCTAGGCACTGATGTCAATCTATATGCTTTGGTTTTTGGAGAATCTGTTTTGAATGATGCAATGGCAATATCTCTGTACAGGACAATGTCATTGGTTAAAAATAATCCAACTGGACAGAATTTCTTCATGGTGGTTGTTAGATTCTTGGAGACTTTTGTTGGGTCTATGTCTGCAGGGGTTGGAGTTGGGTTTACATCTGCTTTACTATTTAAGTATGCAGGCTTGGATGTTGACAACCTTCAGAATTTGGAGAGCTGTCTTTTTGTTCTCTTCCCATATTTCTCGTACATGCTGGCTGAAGGCCTTGGTCTGTCTGGTATCGTATCAATATTATTCACAGGAATTGTCATGAAGCACTATGCGTATTCAAATTTGTCACGAAGTTCTCAAAGATTTGTCTCTGCATTTTTTGAATTGATATCATCATTAGCAGAAACATTTATATTTATATATATGGGCTTTGACATTGCTATGGAACAACATAGCTGGTCTCATGTTGGATTTATATTCTTCTCCATTATATTCATTATAGTTGCAAGAGCTGCAAATGTCTTTTCTTGTGCTTACCTGGTCAATCTTGTGAGACCTGCACATCAACAGATACCTCCAAAATACCAAAAAGCACTTTGGTATAGTGGACTTCGAGGGGCAATGGCCTTTGCCCTTGCTCTGCAATCAGTTCATGATCTTCCAGAAGGACATGGACAGACCATCTTCACTGCAACTACAGCAATCGTTGTTTTGACGGTATTGCTGATTGGTGGTTCAACAGGTACCATGCTGGAAGCTCTAGATGTCGTCGGTGGTGAAGATCACAATGATAACTCTTTGGCTGCAGTTGGTCCCATCACAAATTATGAGGAGGACAATGGTTATATTGCTCCTTCATATGATGACGAATCATCGTCATCTGGGAACAAAATAAAGATGAAGCTAAAAGAATTCCACAAGAGTGCTGCATCTTTTACAGCATTAGATAGAAACTACCTTACCCCATTCTTTACAAGCAATAATGGAGAAGACGATGAAGAAGCCCAGCCTTTTACTTCCAGAAGTTCTTTTACTTCTTCAAGATCAGGATTTCACGGCCAGAGCCCATATTCACCATCATGA 1635 0.4086 MGSENEISPADARKAPGKEQQAAGVGILLQIMMLVLSFVLGHVLRRKKIYIIPEASASLLIGLIVGVLANISDTETNIRAWFNFHEEFFFLFLLPPIIFQSGFSLAPKPFFSNFGAIVTFAIFGTFLASVVTGVLVYLGGLLFLMYKLPFVECLMFGALISATDPVTVLSIFQELGTDVNLYALVFGESVLNDAMAISLYRTMSLVKNNPTGQNFFMVVVRFLETFVGSMSAGVGVGFTSALLFKYAGLDVDNLQNLESCLFVLFPYFSYMLAEGLGLSGIVSILFTGIVMKHYAYSNLSRSSQRFVSAFFELISSLAETFIFIYMGFDIAMEQHSWSHVGFIFFSIIFIIVARAANVFSCAYLVNLVRPAHQQIPPKYQKALWYSGLRGAMAFALALQSVHDLPEGHGQTIFTATTAIVVLTVLLIGGSTGTMLEALDVVGGEDHNDNSLAAVGPITNYEEDNGYIAPSYDDESSSSGNKIKMKLKEFHKSAASFTALDRNYLTPFFTSNNGEDDEEAQPFTSRSSFTSSRSGFHGQSPYSPS 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03090 544 PRINTS Na+/H+ exchanger signature 117 125 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Vivi4g03090 544 PRINTS Na+/H+ exchanger signature 88 99 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Vivi4g03090 544 PRINTS Na+/H+ exchanger signature 157 167 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Vivi4g03090 544 PRINTS Na+/H+ exchanger signature 102 116 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Vivi4g03090 544 PANTHER SODIUM/HYDROGEN EXCHANGER 8 531 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Vivi4g03090 544 Pfam Sodium/hydrogen exchanger family 33 436 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vivi4g03090 544 Gene3D - 150 202 - -
Vivi4g03090 544 NCBIfam sodium/hydrogen exchanger 3 31 446 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Vivi4g03090 544 MobiDBLite consensus disorder prediction 507 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03090 Vivi-Chr4 142726484 142733946 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03090 14 519 Antiporters AT5G55470 30.112 8.67e-55 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03090 K14724 - gmx:100790830 882.478