Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03077 ATGAATAAGTCAATTTCAAATACACCATTTGATCCAGGTCCACTCTCATTGCCACCTTCCACCACGACAATGAGTTTTCCTTTGTTTGCTCACAATTATTTTGCTCCTAGAACTGTTATCTTCAACATATATTATCAAATGAATTATTTGAATAGTGCGAGCAAGGTGTTTGATCAAATGCCAAACAGGGACTTCATTTTCCTCTATCTTCCCAGAGAAACTATTTTCACATTAAACACAAGTCTGCAACATGTTGGAAAGATGAGTTTGAACATATTCTCAGTAATGCTACTAGAAAACTTCATGTTCCTTTTCGATCCCGGTGGAAGTCATTGTTGGCTAACAAACTTGCTTCTTAAGTTCGACGACGACGTTGTTATGCATTATTTTTCGTTACGACGGTCTTGCATTATCTTTGGCAAATGGTTTGGTTCTATCCTGTTTGGTTCACAGAAATCCAGAGTTGCGTCATACAAAGTTTGTTGGCCTCCGATTAATGGTGACGAGTGCTTTGATGTAGACATACACGCAGCTTTTGATATGGCAATCCAAAGTTTCGTCTACGACGGTGAATCTGACAAGAACATCGAGATATGGAAGATCAAAGAGTTGATCAAAGTTTTGGAAGCTGCAAGAGGTAATGAAACTAGTAGGATTTCTATGATAATGCCTCCACACGATCAAATATCTCGTGTCACTAAGATGTTGGGAGATGAATATGAAACTGCTTCAAATATCAAAAGTAGGGTAAACCGGCAATCTGTGCTTGGAGGCATTACTTCTACTCAACAGAGGTTGAAACTGTATAACAAGGTTCCTCTAAATGGATTGGTTTTTTATACCAGTACCAGTTTCACTGATGATGGAAGGGAAAAGAAAGTGACAATTGATTTTGAACCTTTTAAACCAATTAGTGCATCACTTTATCCCTGTGATAACATGTTACACACAGAAACTCTAAACGAACTTTTGAGTTACATGCAGGTTTTATCAACATGTTTCACGTCATTTGCTCATGGTGGAAATGATGTCTCACACGCAATAGGTCCGTTAGCCGGTGCACTATCTATTCTGCAAGGCGCTGCAAAAGGAGTTGAGTTAGTTATTTCGATCGATGTTATTGCTTGGGGTGGAATTGGAATAGTTGCAGGGCTAATGATATGGGGTTATAGAGTTATAGCTAAGATTGTAAAGAAAATAATGGAACTTATGCCGACGAGAGGATTTGCCGCCGAATTCGCTGTTGTGTCGTAG 1254 0.3892 MNKSISNTPFDPGPLSLPPSTTTMSFPLFAHNYFAPRTVIFNIYYQMNYLNSASKVFDQMPNRDFIFLYLPRETIFTLNTSLQHVGKMSLNIFSVMLLENFMFLFDPGGSHCWLTNLLLKFDDDVVMHYFSLRRSCIIFGKWFGSILFGSQKSRVASYKVCWPPINGDECFDVDIHAAFDMAIQSFVYDGESDKNIEIWKIKELIKVLEAARGNETSRISMIMPPHDQISRVTKMLGDEYETASNIKSRVNRQSVLGGITSTQQRLKLYNKVPLNGLVFYTSTSFTDDGREKKVTIDFEPFKPISASLYPCDNMLHTETLNELLSYMQVLSTCFTSFAHGGNDVSHAIGPLAGALSILQGAAKGVELVISIDVIAWGGIGIVAGLMIWGYRVIAKIVKKIMELMPTRGFAAEFAVVS 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03077 417 SMART eRF1_1_2 189 325 IPR005140 -
Vivi4g03077 417 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 190 325 IPR004403 GO:0003747|GO:0006415
Vivi4g03077 417 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 192 324 IPR024049 -
Vivi4g03077 417 Pfam Phosphate transporter family 249 414 IPR001204 GO:0005315|GO:0006817|GO:0016020
Vivi4g03077 417 Gene3D eRF1 domain 1 182 324 IPR024049 -
Vivi4g03077 417 Pfam eRF1 domain 1 211 323 IPR005140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03077 Vivi-Chr4 142631637 142633287 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03077 189 325 Eukaryotic Initiation Factors Gene Family AT3G26618 80.292 3.42e-69 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03077 K03265 - rvl:131328824 227.254