Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03011 ATGAAAAGAAAACATGAAGGATGTTGTGTCGTGGGAATAGACCTTGGCACAACTTATTCATGTGTTGCAGTATGGCAGGAAGAACATCATCGAGTTGAGATCATTCACAATGATCAAGGCAATAGAACTACTCCTTCTTTTGTTGCTTTCACAGAAAATCAAAGACTGATCGGTGAAGCTGCTAAGAATCAAGCTTCTGCCAACCCTCTAAACACCGTCTTTGATGCTAAGAGGTTAATTGGTAGGAAGTTTAGTGATCCTATTGTTCAAGATGACATACTTTTATGGCCATTCAAAGTCGTTGCTGGTGTTGACGACCGACCCATGATTACAGTTAAGTACAAAGATCAAGAGAAGCAACTCTATGCTGAAGAAGTATCATCTATGGTACTCACGAAGATGCGAGAAATTGCTGAGAAATATTTAGAATCACCGGTTAAGAATGCAGTTGTTACTGTGCCAGCTTATTTTAATGATTCTCAAAGAAAAGCAACTATTGATGCCGGTGTTATTGCTGGCCTCAATATTATGAGGGTAATGAATGAACCCACTGCCGCAGCAATTGCATATGGCCTTGACAAGAGAACTGGTTGCATTGGAGAACGGAAAATTTTAGTGTTTGATCTTGGTGGCGGCACTTTTGATGTGTCTTTACTAACCATTAAGGGTAATGCCTTCAAAGTTAGGGCAACTGCTGGAAACACTCACCTTGGTGGAGAAGACTTTGATAATAGAATGATGAACTACTTTGTACAAGAGATCAAGAGGAAGAACAAAGTCGATATTAGTGGGAATCCAAAAGCCATGAGGAGGTTGAGAACTGCTTGTGAGAGGGCAAAAAGATCACTTTCTTTCCTTGTTACCGCCTCTATTGAAGTAGATTCTTTATTCCAAGGCATTGACTTTTGTTCTTCAATCAATAGAGCCAAGTTTGAGGAAATGAATATGGACCTTTTTAATGAGTGTATGAAGATTGTTGAAAGTTGTCTAATGGATGCTAAGATGGACAAGAGCAGGATAGATGATGTTGTTCTTGTTGGTGGATCATCTAGAATTCCTAAAGTACAACAGCTACTACAAGACTTTTTTAACGGAAAGGAGTTGTGCATGAGCATAAATCCTGATGAGGCGGTAGCTTATGGGGCAGCTGTTCAGGCTGCATTGTTGAGCAAAGACGTTAAGAATGTTCCAAAATTGGTGCTGCAGGATGTTACACCTTTGTCTCTTGGCAGGTTAACAAAAGGAGATATTATGCATGTGGTGATTCCTAAGAACACTTGCATTCCTGTCAAGAAGACAGTGTCATATTCTTCACCTACAGATAACCAAACCAAGGACTCGATTAAGGTTTATGAGGGTGAGAGAACAAGAGCCAGTGACAACAATTTGCTTGGTTCTTTTACTCTTTCTGGCATTCCCCCAGGTCCTCGCGGCAGCCATCTCTCAAATGTTTGTTTTACTATTGATGAAAATGGTATTTTGACTGTTTCAGCTAATAATAATGTTTCTGGAGTTTCGAGCATGATTACAATAACCAATCACAGAGATAGATTGTCAAGTGAGGAAATTAAAAAACTAATTCAAGAAGCTGAGAATTACCAAAATGAAGACAAGAAATTCCTAAGGAAGGCCACAACCATGAATGCATTGGATGACTACATTTACAAAATGAGAAAAGCTTTAGAGAAAAAGGATATTAATCTAAAGCTCTCCTGTCAAGAAATTGAGATCATCGAATCTACGATTGCTGTGATTACAAATTTGATTGATGAGAATAACCAAGAGGTAGAAATAGATGTTTTGGAAGACCATCTAAAGGGACTTAAGAGTACCATGGAAGGCATTTTAGTTAAGACTATTTAG 1863 0.3875 MKRKHEGCCVVGIDLGTTYSCVAVWQEEHHRVEIIHNDQGNRTTPSFVAFTENQRLIGEAAKNQASANPLNTVFDAKRLIGRKFSDPIVQDDILLWPFKVVAGVDDRPMITVKYKDQEKQLYAEEVSSMVLTKMREIAEKYLESPVKNAVVTVPAYFNDSQRKATIDAGVIAGLNIMRVMNEPTAAAIAYGLDKRTGCIGERKILVFDLGGGTFDVSLLTIKGNAFKVRATAGNTHLGGEDFDNRMMNYFVQEIKRKNKVDISGNPKAMRRLRTACERAKRSLSFLVTASIEVDSLFQGIDFCSSINRAKFEEMNMDLFNECMKIVESCLMDAKMDKSRIDDVVLVGGSSRIPKVQQLLQDFFNGKELCMSINPDEAVAYGAAVQAALLSKDVKNVPKLVLQDVTPLSLGRLTKGDIMHVVIPKNTCIPVKKTVSYSSPTDNQTKDSIKVYEGERTRASDNNLLGSFTLSGIPPGPRGSHLSNVCFTIDENGILTVSANNNVSGVSSMITITNHRDRLSSEEIKKLIQEAENYQNEDKKFLRKATTMNALDDYIYKMRKALEKKDINLKLSCQEIEIIESTIAVITNLIDENNQEVEIDVLEDHLKGLKSTMEGILVKTI 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03011 620 PRINTS 70kDa heat shock protein signature 61 69 - -
Vivi4g03011 620 PRINTS 70kDa heat shock protein signature 149 169 - -
Vivi4g03011 620 PRINTS 70kDa heat shock protein signature 212 222 - -
Vivi4g03011 620 PRINTS 70kDa heat shock protein signature 372 392 - -
Vivi4g03011 620 PRINTS 70kDa heat shock protein signature 340 356 - -
Vivi4g03011 620 PRINTS 70kDa heat shock protein signature 398 417 - -
Vivi4g03011 620 PRINTS 70kDa heat shock protein signature 479 495 - -
Vivi4g03011 620 PRINTS 70kDa heat shock protein signature 39 51 - -
Vivi4g03011 620 PRINTS 70kDa heat shock protein signature 9 22 - -
Vivi4g03011 620 Pfam Hsp70 protein 10 612 IPR013126 GO:0005524|GO:0140662
Vivi4g03011 620 ProSitePatterns Heat shock hsp70 proteins family signature 2. 206 219 IPR018181 -
Vivi4g03011 620 ProSitePatterns Heat shock hsp70 proteins family signature 1. 13 20 IPR018181 -
Vivi4g03011 620 Gene3D - 548 620 IPR029048 -
Vivi4g03011 620 Gene3D - 11 387 - -
Vivi4g03011 620 ProSitePatterns Heat shock hsp70 proteins family signature 3. 343 357 IPR018181 -
Vivi4g03011 620 FunFam Heat shock protein 70 11 199 - -
Vivi4g03011 620 SUPERFAMILY Actin-like ATPase domain 10 194 IPR043129 -
Vivi4g03011 620 PANTHER HEAT SHOCK PROTEIN 70KDA 10 569 IPR013126 GO:0005524|GO:0140662
Vivi4g03011 620 FunFam heat shock 70 kDa protein-like 74 129 - -
Vivi4g03011 620 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 394 547 IPR029047 -
Vivi4g03011 620 FunFam Heat shock 70 kDa 238 321 - -
Vivi4g03011 620 Gene3D - 74 129 - -
Vivi4g03011 620 FunFam Heat shock 70 kDa protein 392 547 - -
Vivi4g03011 620 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 395 551 IPR029047 -
Vivi4g03011 620 Gene3D - 195 369 - -
Vivi4g03011 620 Coils Coil 516 543 - -
Vivi4g03011 620 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 547 619 IPR029048 -
Vivi4g03011 620 Gene3D Actin; Chain A, domain 4 238 321 - -
Vivi4g03011 620 SUPERFAMILY Actin-like ATPase domain 201 390 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03011 Vivi-Chr4 140388145 140390150 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03011 1 618 Calmodulin-binding Proteins AT3G12580 64.136 0.0 802