Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02997 ATGAAGGGAAAACATGAAAGAAATTGTGCTGTGGGAATAGACCTTGGAACAACGTATTCATGTGTTGCAGTATGGCAAGAACAACACTGTCGAGTTGAGATCATTCACAACGATCAAGGCAATAGAACTACTCCTTCTTTTGTTGCTTTCACAGAAAATCAAAGACTGATCGGTGATGCTGCTAAGAATCAAGCTGCTACCAACCCTCAAAACACCGTCTTTGATGCTAAGAGGTTAATTGGTAGAAAGTTTAGTGACCCTATTGTTCAAGATGATATTCTTTTATGGCCATTCAAAGTAGTTGCTGGTGACAATGACAAACCCATGATTATGGTTAAGTACAAGGATCAAGAAAAGAAACTATATGCCGAAGAAGTATCATCTATGGTACTCACCAAGATGCGAGAAATTGCTGAGACATATTTAAAATCAAATGTTAAGAATGCTGTTGTTACTGTGCCAACTTATTTTAATGATGCTCAGCGAAAAGCCACTATAGATGCTGGTGTTATTGCTGGCCTTAATGTTATGAGGGTAATGAATGAACCTACTGCGGCAGCTGTGGAGAACGGAATTTTTGTCTTTGATCTTGGTGGTGGTACTTTTGATGTGTCTCTACTAACTATCAAGGGTGATGTGTTCAAAGTAAAGGCAACTGCTGGAAACACTCACCTTGGAGGAGAAGACTTTGATAACAGGATGGTGAACTACTTTGTACAAGAGTTCAAGAAAAAGAACAAAGTGGATATTAGTGGAAATCCAAGAGCCTTGAGGAGGTTGAGAACAGCTTGTGAAAGGGCAAAAAGATCACTTTATTTCCTTGTTACCGCCACTATTGAAGTAGATTATTTATTTCAAGGCATTGACTTTTTGTCATCCATCAATAGGGCCAAGTTTGGGGAAATGAATATGGACCTTTTCAATGAGTGTATGAAGACCGTTGAAAGTTGTCTTACTGACGCTAAGATGGATAAAGGAAGGGTAGATGATGTTGTTCTAGTTGGTGGATCTTCTAGAATTCCTAAAGTACAAGAGCTATTACAAGACTTTTTTAAAGGAAAAGAGTTGTGCATGAACATTAATCCTGATGAGGCTGTAGCTTATGGGGCAGCTGTTCAGGCTGCATTGTTGAGTGAAGATGTTAAGAATGTTCCAAATTTGGTGCTGCAGGACGTTACACTATTGTCTCTTGGCAGGTCAGTAGTAGGAGATATCATGAGTGTGGTGATTCCTAGGAACACTTGCTTTCCTGTCAAGAATACACTACAGTATTCTACGGTTGAAGATAACCAATCTTATTCCTTGATTAAGGTTTATGAGGGTGAGAGAACAAGAGTTGGTGAAAACAATTTGCTTGGTTCTTTTACTCTTTCTGGTCATACCCCTGCTCCTCGTGGCCACCCTTATGATGTTTGTTTTTCTATAGATGAAAATGGTGTTTTGACAGTTTCGGCTAAGGAATGCTCCACTGGTAAAATGAATGAGATTTCAATAACCAATCACAAAGAGAGGATATCAGTCGAAGAAATTAGAAAATTGATTAAAGAGGCTGAGATTTACCATATTGAAGACATGAAATTCCTAAGAAAGGCCAAAGCACTGAATTTATTGGATGACTACATATACAAAATGACAAATACTTTAAAGAAAAATGATACTGATTCGAAGCTTTACTCACAAGAAGTCAAAATGATTGAAGATGTAATTGCAGTGGCTAAAAACCTCGTCGACGAGAATAACAAGCAGGTTGAAATAGAAGTTCTGGAAGATCACCTAGATGGGCTTGAGAGTAGAATGAAACACATTATAGCTAAGACTATTTAG 1824 0.3816 MKGKHERNCAVGIDLGTTYSCVAVWQEQHCRVEIIHNDQGNRTTPSFVAFTENQRLIGDAAKNQAATNPQNTVFDAKRLIGRKFSDPIVQDDILLWPFKVVAGDNDKPMIMVKYKDQEKKLYAEEVSSMVLTKMREIAETYLKSNVKNAVVTVPTYFNDAQRKATIDAGVIAGLNVMRVMNEPTAAAVENGIFVFDLGGGTFDVSLLTIKGDVFKVKATAGNTHLGGEDFDNRMVNYFVQEFKKKNKVDISGNPRALRRLRTACERAKRSLYFLVTATIEVDYLFQGIDFLSSINRAKFGEMNMDLFNECMKTVESCLTDAKMDKGRVDDVVLVGGSSRIPKVQELLQDFFKGKELCMNINPDEAVAYGAAVQAALLSEDVKNVPNLVLQDVTLLSLGRSVVGDIMSVVIPRNTCFPVKNTLQYSTVEDNQSYSLIKVYEGERTRVGENNLLGSFTLSGHTPAPRGHPYDVCFSIDENGVLTVSAKECSTGKMNEISITNHKERISVEEIRKLIKEAEIYHIEDMKFLRKAKALNLLDDYIYKMTNTLKKNDTDSKLYSQEVKMIEDVIAVAKNLVDENNKQVEIEVLEDHLDGLESRMKHIIAKTI 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02997 607 PRINTS 70kDa heat shock protein signature 61 69 - -
Vivi4g02997 607 PRINTS 70kDa heat shock protein signature 39 51 - -
Vivi4g02997 607 PRINTS 70kDa heat shock protein signature 328 344 - -
Vivi4g02997 607 PRINTS 70kDa heat shock protein signature 9 22 - -
Vivi4g02997 607 PRINTS 70kDa heat shock protein signature 360 380 - -
Vivi4g02997 607 PRINTS 70kDa heat shock protein signature 386 405 - -
Vivi4g02997 607 PRINTS 70kDa heat shock protein signature 466 482 - -
Vivi4g02997 607 PRINTS 70kDa heat shock protein signature 149 169 - -
Vivi4g02997 607 SUPERFAMILY Actin-like ATPase domain 10 191 IPR043129 -
Vivi4g02997 607 ProSitePatterns Heat shock hsp70 proteins family signature 1. 13 20 IPR018181 -
Vivi4g02997 607 SUPERFAMILY Actin-like ATPase domain 189 378 IPR043129 -
Vivi4g02997 607 PANTHER HEAT SHOCK PROTEIN 70KDA 10 560 IPR013126 GO:0005524|GO:0140662
Vivi4g02997 607 ProSitePatterns Heat shock hsp70 proteins family signature 2. 194 207 IPR018181 -
Vivi4g02997 607 ProSitePatterns Heat shock hsp70 proteins family signature 3. 331 345 IPR018181 -
Vivi4g02997 607 FunFam Heat shock 70 kDa 226 309 - -
Vivi4g02997 607 Gene3D - 11 375 - -
Vivi4g02997 607 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 381 534 IPR029047 -
Vivi4g02997 607 Gene3D - 535 607 IPR029048 -
Vivi4g02997 607 Gene3D - 74 129 - -
Vivi4g02997 607 FunFam Heat shock 70 kDa protein 74 129 - -
Vivi4g02997 607 Pfam Hsp70 protein 10 604 IPR013126 GO:0005524|GO:0140662
Vivi4g02997 607 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 533 606 IPR029048 -
Vivi4g02997 607 Coils Coil 578 605 - -
Vivi4g02997 607 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 383 537 IPR029047 -
Vivi4g02997 607 Gene3D Actin; Chain A, domain 4 226 309 - -
Vivi4g02997 607 Gene3D - 192 357 - -
Vivi4g02997 607 FunFam Heat shock protein 70 11 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02997 Vivi-Chr4 139839466 139841484 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02997 1 605 Calmodulin-binding Proteins AT3G12580 63.166 0.0 765