Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02969 ATGGCCATGGAAACCGAGGTTGCCACCACCACTCCACAGTTGGCACTGTCCGATACAGACATAAACTGGGACAGATTGGATAAGACTAGGTTTCATATCATAGGTGCAATACTCTTCACAGCTCAGTCAGCATTACTTCATCCAACAGCAGTGGTGAAAACAAGGATGCAAGTAGCTAGTTCAGGACTCTCTAACATGAAGGGAATGTCAGTGTTCACTCATATTTTGAAGAGTGATGGAATTCCAGGAATCTTTAGAGGTTTTGGTACTTCTGCTATTGGATCAATGCCTGGTAGGGTTTTAGCCCTCACATCTCTTGAGATGTCAAAGGATATTGTGTTGAAACACACTCAAGGTAGTGATATTCCAGAAGCTTCAAGGATTGGACTTGCAAATGGAGTTGCTGGCATGGTTTCTAATTTGGTATCTTGTGTTTATTTTGTGCCCTTGGATGTGATCTGCCAGAGGTTAATGGTTCAAGGTCTACCTGGAACTTCATGTTGTAGAGGACCATTTGATGTTATCCGAAGAGTGCTGCATGCGGAGGGTTTTCGTGGTTTGTATAGAGGTTTTGGATTAACGGCTGTAACGCAATCTCCAGCATCTGCACTTTGGTGGGGTTCATATGGTGCAGCACAACACATAATTTGGAGGAGTTTAGGATACAATGATGATATGGAAAAGAAGCCTTCACATGTGGAAATGGTGACAGTTCAGGCTACTGCTGGGATGGTGGCTGGCGCTTGTTCGTCTGTTATCACTACTCCCATAGATACCGTTAAAACACGACTTCAGGTTATGGACAATTATGGTTCTGGAAGGCCATCTGTACTGAAGACGGCAAGAACTCTCGTTAAGGAAGATGGATGGTGGGGATTTTACCGAGGGTTTAGACCAAGATTTTTGAATATGTCACTCTATGGAACAACTATGATTGTTACTTATGAACTCATAAAGAGATTATCAGTACAACCAAGTATGAGTTCTTTTGCTTAA 996 0.4267 MAMETEVATTTPQLALSDTDINWDRLDKTRFHIIGAILFTAQSALLHPTAVVKTRMQVASSGLSNMKGMSVFTHILKSDGIPGIFRGFGTSAIGSMPGRVLALTSLEMSKDIVLKHTQGSDIPEASRIGLANGVAGMVSNLVSCVYFVPLDVICQRLMVQGLPGTSCCRGPFDVIRRVLHAEGFRGLYRGFGLTAVTQSPASALWWGSYGAAQHIIWRSLGYNDDMEKKPSHVEMVTVQATAGMVAGACSSVITTPIDTVKTRLQVMDNYGSGRPSVLKTARTLVKEDGWWGFYRGFRPRFLNMSLYGTTMIVTYELIKRLSVQPSMSSFA 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02969 331 Pfam Mitochondrial carrier protein 131 217 IPR018108 -
Vivi4g02969 331 Pfam Mitochondrial carrier protein 33 116 IPR018108 -
Vivi4g02969 331 Pfam Mitochondrial carrier protein 238 322 IPR018108 -
Vivi4g02969 331 SUPERFAMILY Mitochondrial carrier 24 317 IPR023395 -
Vivi4g02969 331 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 12 324 - -
Vivi4g02969 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 27 112 IPR018108 -
Vivi4g02969 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 234 321 IPR018108 -
Vivi4g02969 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 127 215 IPR018108 -
Vivi4g02969 331 Gene3D Mitochondrial carrier domain 33 327 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02969 Vivi-Chr4 138188281 138190867 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02969 18 321 Chloroplast and Mitochondria Gene Families AT5G15640 50.000 1.04e-105 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02969 K15121 - gmx:112997745 570.466