Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02965 ATGAAGCCTTTGGATTTAGCTCTTCTTGTTCCAGCATCAACAACTTTGGTATTAGCTGAGATTCACAGAAAATATATCTTTGCTGGCCATGTTAATGCCTATATGAAGACATTGATTGAAGACGAGCTTGAGAAGTACCAAACTCACTTCAGCCTATATATCAAGAAAGGGATAGAAGCTGATGGAATTGAAGAACTTTACAAGAAGGTTCATGCTGCTATTCACGCCTATCGCTCAATCATGAAAAATGTAAAATGTACTGAAGATGTGTATTGTCTTTCGATCAGGTACAACTTGAAGAAGCTCACTTATGATGAGAGAAGGACAAAGTTGATTGCTCGCTTGGAGGCACTAAATTCTGCCGTGGATGAAGACGAGGATGATGAGTGA 390 0.3923 MKPLDLALLVPASTTLVLAEIHRKYIFAGHVNAYMKTLIEDELEKYQTHFSLYIKKGIEADGIEELYKKVHAAIHAYRSIMKNVKCTEDVYCLSIRYNLKKLTYDERRTKLIARLEALNSAVDEDEDDE 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02965 129 Coils Coil 108 128 - -
Vivi4g02965 129 Gene3D - 5 122 - -
Vivi4g02965 129 PANTHER RIBOSOMAL PROTEIN L5-RELATED 19 121 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Vivi4g02965 129 Pfam Ribosomal L18 C-terminal region 63 119 IPR025607 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02965 Vivi-Chr4 137651318 137653954 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02965 19 121 Cytoplasmic Ribosomal Protein Gene Family AT3G25520 64.078 2.36e-36 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02965 K02932 - vvo:131597944 258.07