Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02915 ATGGAGGAGGAGAAGAGAGAGGCAAACACAAACCCCACCAACTCATCCTCCACCACCACCACCATGGCATTTTCCGACGAGATTCCGACCACAACCACCACCATCAACAATAACACATCTTTATTCCCTTTTCAACCTTCCATCTCCACCATCTTTGACACGTTACCATCATCTTCCTCGTGTGACCAAAAGGTTTCCTCTTTTGGATTCATGGACTTGTTAGGTTCCCATGATTACAACATAAACAGCAACACTTTTTTGTTATCCGATTGGGTTCTTCCTACAACCACCACCACAGTCCATCAACCTCTTCCCTCGCCGGCGAGCTCCAACGTCCTGGACTCCTCCGAGGTGCTGAATACACCGACGTCGCCGAACTCAACTTCAATTTCTTCGTCGTCTAATGAAGCAACCTTTAACAACAACACCATAGAACAACAACAACAACAACATAGAAGTAAAGTTTCAAAAAATGAACATGATGCAGAGGTAGAAGAAGAAGATGGAAATGGAGTCAAAGAAAATGACCAATATCAAGACAAGACAAAGAAACAGCTAAAAGCAAAGAAGAAGAATCAAAAGAAGGAAAGAGAACCCAGATTTGCTTTCATGACAAAGAGTGAAGTTGATAACCTAGACGATGGCTATAGATGGCGTAAGTACGGACAAAAAGCGGTTAAAAACAGTCCATATCCCAGGAGTTACTATCGTTGTACAACGGCAGCCTGCGGCGTGAAAAAGCGCGTGGAGCGTTCATCGGATGATTCCACCATTGTCGTCACTACATACGAGGGTCAACACATACATCCTTCACCTGCCACGTCACGTCCTAGCCTTAGCTTCGTTAACGAACCTACTAGCTTCGGTGCCGGTGCATTTGGTGGTGGCAGTTCAACTTCAGGTTCACAATCACACTCACACTTTGTTCTACCACACGCTTCATCATTGTTGTACAATACTCGTACTACTAATCCCACTACCAATTCTAGTACTACACCCCCATCACTTGGTTCTAGTGGTGGTTATGTTAACACGTCGTCGTTTGGTGGTTTTGTTCATGACCAAGAGATTAATCAGAGAGGTTTTGGAGGTTCCTATGAGGTTTTGTCAAGAGACAATGGGTTGCTTCAGGATATTATTATTCAGATGAAAAAAGAGGAGAAAGATTCAATCAATGAACAACACTAG 1188 0.4377 MEEEKREANTNPTNSSSTTTTMAFSDEIPTTTTTINNNTSLFPFQPSISTIFDTLPSSSSCDQKVSSFGFMDLLGSHDYNINSNTFLLSDWVLPTTTTTVHQPLPSPASSNVLDSSEVLNTPTSPNSTSISSSSNEATFNNNTIEQQQQQHRSKVSKNEHDAEVEEEDGNGVKENDQYQDKTKKQLKAKKKNQKKEREPRFAFMTKSEVDNLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAACGVKKRVERSSDDSTIVVTTYEGQHIHPSPATSRPSLSFVNEPTSFGAGAFGGGSSTSGSQSHSHFVLPHASSLLYNTRTTNPTTNSSTTPPSLGSSGGYVNTSSFGGFVHDQEINQRGFGGSYEVLSRDNGLLQDIIIQMKKEEKDSINEQH 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02915 395 Gene3D WRKY domain 196 273 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi4g02915 395 FunFam WRKY transcription factor 57 198 272 - -
Vivi4g02915 395 SMART WRKY_cls 212 271 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi4g02915 395 SUPERFAMILY WRKY DNA-binding domain 204 272 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi4g02915 395 MobiDBLite consensus disorder prediction 152 183 - -
Vivi4g02915 395 MobiDBLite consensus disorder prediction 319 340 - -
Vivi4g02915 395 ProSiteProfiles WRKY domain profile. 207 272 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi4g02915 395 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 111 318 IPR044810 GO:0003700
Vivi4g02915 395 MobiDBLite consensus disorder prediction 1 23 - -
Vivi4g02915 395 MobiDBLite consensus disorder prediction 101 199 - -
Vivi4g02915 395 MobiDBLite consensus disorder prediction 101 151 - -
Vivi4g02915 395 Pfam WRKY DNA -binding domain 213 269 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02915 Vivi-Chr4 136364510 136366407 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02915 182 387 WRKY Transcription Factor Family AT2G47260 49.528 5.55e-55 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi4g02915 WRKY 2.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02915 - - mtr:11408791 458.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g02915 4 136364510 136366407 Vivi4g02915 4 136364510 136366407 ECH
Vivi4g02915 4 136364510 136366407 Vivi1g00997 1 21194208 21196439 PCT