Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02913 ATGCTTCAGCCATTGATGAATCTTCTCTCTCCATGTTGGAAGCCGTTCGGGCACGGTGACGATTCTTCAGCAGGCATTGTTGGAAGAGAAGGCAAAGACGGATTGCTTTGGTTTCGTGACATCGGAAGATATGGCTCCGGTGAATTCTCTATGGCCGTTGTTCAGGCCAATCAAATCCTCGAAGATCAGAGCCAGATCGAATCTGGACCGCTTGGAACTTTCGTCGGCGTTTACGACGGGCACGGTGGACCCGACGCCGCGCGTTACGTTTGCGATCACTTGTTCCGCAATTTTCAAGCGGCATCGAGTGAGTCGCAGGGTATTGTGACGGCCGAGACAATTCAGACCGCTTTTCGATCGACGGAAGAGGGGTTTACTGCTATGGTTACTGATTTATGGAATACTCGGCCTCAAGTTGCGACTACTGGAACATGTTGTTTGGTTGGAGTGATTTTTCAGCAGACGCTATTTGTGGCAAATTTAGGAGATTCTCGGGTTGTATTGGGAAAGAAAGTTGGGAATACTGGTGGGGTTGCGGCGATTCAGCTGTCGACGGAACATAATGCGAATCTTGAGGCTGTTAGACATGAACTTAAAGAGTTACATCCTCATGATCCTCAGATTGTTGTTCTCAAGCATGGAGTGTGGAGAGTAAAAGGCATTATTCAGGTTTCTAGATCTATAGGTGACGTATATATGAAACATGCACAGTTTAACCGGGAGCCAATTAATCCAAAGTTCCGACTTCCTGAACCAATGCACATGCCTATCTTGTCTGCTAATCCATCTATTCTTACTCATCCTCTCCAACCAAATGATTCCTTCCTTATATTTGCATCAGATGGTTTATGGGAGCACCTGAATAATGATCAAGCAGTCGAGATTGTTCACAGAAGTCCGCGAGCGGGTAGTGCCAAGAGACTTATCAAGGCTGCCCTGCAGGAAGCAGCTAGAAAACGTGAAATGCGATATTCGGACCTTCGTTCAATTGACAAGAAAGTTCGACGGCATTTTCATGATGATATAACTGTTATTGTTTTATTCTTAAACTCTGACCTTATAACTAGAGGTACAGTTCAAAACCCGCCGCTGTCAATTCGAAGTGCTCTCAATCACTGA 1119 0.4576 MLQPLMNLLSPCWKPFGHGDDSSAGIVGREGKDGLLWFRDIGRYGSGEFSMAVVQANQILEDQSQIESGPLGTFVGVYDGHGGPDAARYVCDHLFRNFQAASSESQGIVTAETIQTAFRSTEEGFTAMVTDLWNTRPQVATTGTCCLVGVIFQQTLFVANLGDSRVVLGKKVGNTGGVAAIQLSTEHNANLEAVRHELKELHPHDPQIVVLKHGVWRVKGIIQVSRSIGDVYMKHAQFNREPINPKFRLPEPMHMPILSANPSILTHPLQPNDSFLIFASDGLWEHLNNDQAVEIVHRSPRAGSAKRLIKAALQEAARKREMRYSDLRSIDKKVRRHFHDDITVIVLFLNSDLITRGTVQNPPLSIRSALNH 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02913 372 PANTHER PROTEIN PHOSPHATASE 46 347 IPR015655 GO:0004722|GO:0006470
Vivi4g02913 372 Pfam Protein phosphatase 2C 71 318 IPR001932 -
Vivi4g02913 372 ProSiteProfiles PPM-type phosphatase domain profile. 45 349 IPR001932 -
Vivi4g02913 372 CDD PP2Cc 49 349 IPR001932 -
Vivi4g02913 372 ProSitePatterns PPM-type phosphatase domain signature. 74 82 IPR000222 GO:0043169
Vivi4g02913 372 SUPERFAMILY PP2C-like 57 350 IPR036457 -
Vivi4g02913 372 SMART PP2C_4 35 347 IPR001932 -
Vivi4g02913 372 FunFam Probable protein phosphatase 2C 42 39 357 - -
Vivi4g02913 372 Gene3D - 40 358 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02913 Vivi-Chr4 136144081 136149514 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02913 5 366 PP2C-type Phosphatase Gene Family AT3G12620 58.491 5.90e-158 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02913 K01102 - qsa:O6P43_003685 638.262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g02913 4 136144081 136149514 Vivi4g02913 4 136144081 136149514 ECH
Vivi4g01121 4 34717173 34721940 Vivi4g02913 4 136144081 136149514 PCT