Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02907 ATGGCGAAGTCGAAGAATCACACCGCTCACAATCAATCTTACAAAGCACACAAGAATGGCATCAAAAAGCCAAAGAGGCATCGCCACACTTCAACCAAAGGGATGGATCCAAAGTTTTTGAGGAACCAGAGGTACGCAAGGAAGCACAACAAGAAAAGTGGAGAAATCGCTTCCGAGTAA 180 0.45 MAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKSGEIASE 59
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02907 59 Pfam Ribosomal L29e protein family 3 42 IPR002673 GO:0003735|GO:0005840|GO:0006412
Vivi4g02907 59 Gene3D - 1 59 - -
Vivi4g02907 59 PANTHER 60S RIBOSOMAL PROTEIN L29 1 55 IPR002673 GO:0003735|GO:0005840|GO:0006412
Vivi4g02907 59 MobiDBLite consensus disorder prediction 1 59 - -
Vivi4g02907 59 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02907 Vivi-Chr4 136090449 136091018 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02907 1 58 Cytoplasmic Ribosomal Protein Gene Family AT3G06700 87.931 2.28e-32 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02907 K02905 - gmx:100499874 125.946