Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02889 ATGGAAAACTTGTACAATTTTGGTGAGTTCAGTTTCAATGCAGTTGAAGATAAACTTAGTTCATCCAATGATATTTTCTGGGAAACCAAGAAAGTTCATGAGATAAAAAATGCTCAATTTTTTGTTGCAGAAGATCTAGGAGAGTTTAATGGAACTGAGTCTCTGTGCTCTAATTTTGGTTTCTTTCAAGATGATCCATCATATGAAGGCGAGTTTCTTCTTTCCACCGATCAACAAAAGTTTCAAGATTATGAAACTTTCGATAACCTACAATTCGACATGGTTAACTTTGATGAACAACTACGTACAACAAAAAATCTTCCACTTCCTGACACAGAAAATGATAAACAACACTACCAAACTCCTTTAGCAGCGGTCGAGATATTAAAGAATTACGGCAAAGGATTCAAGAAGTTATTGTTACCGGATGAAGGAAAAATCATTCATCCAGTAAATGATTTCGGTTTTGTCACAAGCAATGAAAATGAGAGAAAGTTGTCGACTACGGATATCATGAAGGTGGCTGGAACGAGATTCATACAATCTTCTTCGTCGGAATCTGCATTATCAGGTTTGATTCTTAATCACCCTTTTGGTTTTAGTTTCTCTGGTTTATCAGATGAAGAGAAAGAAGATGTTTCACTTGTTGAATCGCTATTAGCTTGTGCTGAAAAAGTTGGATATCAACAATTTGAACGTGCTAGATTTTTTTTACCGCAAATCGAGTCGTTATCTTCGAAGACAGGTAATCCGGTTAAACGCCTGGTTCATTATTTCGTCAAAGCTCTCCGCCAAAGAATTGACAGAGAAACAGGTAGAGTTTGTGCTGACAGTTTGCAAAAGGCAGAGTCTTTATTTGATCCTGAAGAGGACGCCAAGGTTCTAAATCCGACCCTTCTTGCGTTTATCGAAGATCTTCCGTTTTGTAAAATTTCAATGTTCACATGTGTACAAGCTTTAATAGAGAATTTTAAAGATGCAAAGAAAATTCATGTTATTGATCTCGAAATTCGGAAAGGGTTACAATGGACAATCCTAATACAAGCACTTCAATCGAGAAACGAATGTCCACTCGAGCTTCTAAAGATAACAGCTATTGCGAGCGGAAATATAGACACCACAAAGCAGATAGCCGAAGAAACCTGTAAAAGATTGAAAGATTTTGCGCAAAGTTTGAACATACCTTTTTCCTTCGATATAGTTGTTGTATCCGATTTATTACATCTAAGAAAAGATCATTTCAAAATAGATTCCGATGAAACAGTCGCGGTTTATTCTCAATATGCGTTACGAAACAAGATTCCACAATCAGACCAACTCGAAACAATCATGAGAGTTATTAGAACTATAAACCCGATAGTAATGGTTGTCGGGGAGATTGAAGCCAATCACAACTCTAAGTCTTTTGTGAACCGTTTCATCGAAGCGCTATTCTACTTTAGCGCTTTTTTCGATTGTTTAGAAGATTGTATGAAAGGTAACGAGAAAAACAGAATAATTCTAGAATCGATGTATTTTAGTTACGGTATAATGAATACCGTGGCGAAAGAAGGAGCCGAAAGAAAGAGTAGGAATGTGAAGATTGATGTGTGGAGAGCATTTTTTAAAAGATTTGGAATGGTGGAAACAGAATTGAGTATGATGAGTTTGTATCAAGCTGAATTGGTTGCTAAAAGATTTGCTTGTGGAAATTCTTGCACATTTGAAATGAATGGAGAGTGCCTTGTTATTGGGTGGAAAGGAACACCAATTAACTCTGTTTCTGTTTGGAAGTTCATTTGA 1782 0.3636 MENLYNFGEFSFNAVEDKLSSSNDIFWETKKVHEIKNAQFFVAEDLGEFNGTESLCSNFGFFQDDPSYEGEFLLSTDQQKFQDYETFDNLQFDMVNFDEQLRTTKNLPLPDTENDKQHYQTPLAAVEILKNYGKGFKKLLLPDEGKIIHPVNDFGFVTSNENERKLSTTDIMKVAGTRFIQSSSSESALSGLILNHPFGFSFSGLSDEEKEDVSLVESLLACAEKVGYQQFERARFFLPQIESLSSKTGNPVKRLVHYFVKALRQRIDRETGRVCADSLQKAESLFDPEEDAKVLNPTLLAFIEDLPFCKISMFTCVQALIENFKDAKKIHVIDLEIRKGLQWTILIQALQSRNECPLELLKITAIASGNIDTTKQIAEETCKRLKDFAQSLNIPFSFDIVVVSDLLHLRKDHFKIDSDETVAVYSQYALRNKIPQSDQLETIMRVIRTINPIVMVVGEIEANHNSKSFVNRFIEALFYFSAFFDCLEDCMKGNEKNRIILESMYFSYGIMNTVAKEGAERKSRNVKIDVWRAFFKRFGMVETELSMMSLYQAELVAKRFACGNSCTFEMNGECLVIGWKGTPINSVSVWKFI 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02889 593 ProSiteProfiles GRAS family profile. 206 591 IPR005202 -
Vivi4g02889 593 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 183 586 IPR005202 -
Vivi4g02889 593 Pfam GRAS domain family 215 591 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02889 Vivi-Chr4 135619791 135622228 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02889 205 592 GRAS Transcription Factor Family AT3G03450 30.479 5.89e-58 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vivi4g02889 GRAS 1.9e-91 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02889 - - gmx:100798926 731.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g02889 4 135619791 135622228 Vivi4g02889 4 135619791 135622228 ECH