Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02861 ATGATGGCACAAAACTTAACGGGGCAGCTTGTTGGTTCAGAGATACATGGCTTCCACACTTTGAGTGATCTTGATGTTGGGGAAACTTTGGAGGAAGCAAAAAGCAGATGGCTTCGTCCAAATGAGATTCATGCCATTCTCAGCAATTACAAATATTTTACTATTCATGTCAAGCCAGTGAATTTGCCCAAAAGTGGTACTCTTGTACTATTTGACCGCAAGATGCTTAGGAACTTCCGAAAAGATGGGCACAACTGGAAAAAGAAAAATGATGGGAAAACTGTTAAAGAAGCTCACGAGCACTTAAAAGTTGGTAATGAAGAGAGGATCCACGTATATTATGCACATGGCCAAGATTGCCCAAGCTTTGTTCGAAGATGTTATTGGCTGCTTGATAAGAGTCTGGAGCACATAGTCCTTGTTCATTATCGTGAGACACAGGAGTCTCAAGGCTCTCCTATTACACCGGTAAGTTCATTAGGTTGTGGATTGACACAGTCTCAAGGCTCTCCTTTTACACCGGTAAATTCAAATTCGAGCTCTATTTCTGATCCAACTACGTCGTGGATTCCATCAGAAGACTTAGATTCTGGAACCAATAGTGCTTTTACTAATGGTAGAAGTCTTGAACAGAAGCTTCATGAGCTCAATACACTTGAATGGGATGACCTAGTGGCTTCTCATGGTAATACTAGTACTATACCCAATGGAGCAGGAAACGAACCACATTTCTATCAACTAAATCAAAGCTTAATGAATGGAAGCGTTAGCAATGTTGCCGGGAGTCCAGCAGAAGTTCATTCTTTTGGGAATTCACCTCCACTAGAGTCTGGGACTAGTAATGTTTCTTACAGTTTCCAAGAATGTGTTAACCCTCAAAAGAATCATGCTATCACTTTTGGTGGTGTTGATTCCGTGGATAACACTTTAGTCAATGAAGGCTTGCAAAGTCAGAACAGCTTTGGAAATTGGATGAACAGTGCCATTTCTAATACACCATGTTCTGTAGAAGCATCAGCTCTTGAATCATCAATTGCTTCATCTGTTCATGATCCATTTTCATCCCTGCGGATGGACAATAATCAGCAACCTTCACTGCCGGAACAAGTGTTTCATATCACTGAATTGGCCCCTGCATGGGCTTCTTCCACGGAAAAAACAAAGGTCCTGATAACTGGATATTTTCACCATGATTATCAACACTTTGCAAAGTCCAATCTAGTGTGCGTCTGTGGCGAAACAATTGTTCCTGTAGAAATTGTTCAGGTTGGAGTTTACCGATGCTGGGTATTGCCGCATTCTCCAGGATTCGTAAATCTCTATTTGAGCTTTGATGGCCATAAGCCCATTAGCCAAATTGTTAATTTTGAGTATCGTACTCCTATTTTGCACGACCCTGCTGCTTCGATGGAAGATACATACAACTGGATTGAGTTTCGACTTCAGATGAGGCTTTCTCATTTGCTTTTTACAACACAAAAGACCCTTGATTCTTTCTCTAGTAAAGTATCACCTACTGCACTCGAAGAGAGTAAAAAATTCGCCTCCAAAACATTATTTATTTCCAAAAGTTTGCAACACTTTATGAAGTCGTCCGACGCAAACACAACTCCATTTCCGCAAGCAAAAAATACCTTCTTCGAAATTGCGTTGAAGAACAAGTTAAGAGAATGGCTTTTGGAACGAATTGTACTAAGATGTAAGACTGCGGAGTATGATGCACAAGGGCAAGGTGTGATTCATCTGTGTACACTTTTGGGATATACTTGGGCTATTACATTATTTTCATGGTCAGGCTTGTCGCTCGATTTCCGTGACAAATTTGGATGGACAGCTCTTCATTGGGCAGCATATAATGGAATGGAGAAAATGGTTGCGACTCTATTGTCTTGTGGGGCAAGGCCTAACTTGGTGACAGATCCAACTCCACAAAATCCCGGTGGCTGTACTGCTGCTGACCTTGCTTACATGAATGGATATGATGGTTTAGCCGCTTATCTTTCGGAAAAGTGTTTGGTTGAGCAGTTCAACGACATGAGCTTAGCTGGAAATATCAGTGGTTCACTCGAAACCACCACGACTGATCCAGTAAATCCAGAGAACCTTACCGAGGACCAATTGTACCTAAAGGATACATTGGCAGCTTACCGAACAACAGCTGACGCAGCAGCACGCATACAAGCTGCGTTTAGAGAGCGCTCACTAAAATTGCGCTATCAGTCGGTTCAATTTAGCAGCCCGGAGGAGGAAGCACGCCAAATAGTAGCAGCAATGAAGATTCAACATGCCTTTCGCAACTTTGAGACAAGGAAAACGATGGCAGCCGCTGTTCATATTCAGCATAGATTCCGTACGTGGAAGTTGCGTAAAGAATTTCTCCACATGCGGCGTCAGGCTATAAAAATTCAAGCTGCATTCAGGGGCTTTCAAGTGCGTAGGCAATATCGTAAGATTTTATGGTCTGTTGGAATTCTTGAGAAAGCAATCCTCCGTTGGCGTTTAAGGAGAAAAGGTTTTCGCGGACTTGAGGTGAGTCCTGTCGAAGAGATGATAAATGAGAAGCATGAAAGCGACGTAGAAGAAGAGTTCTTTAAGACCGGTAGGAAACAAGCAGAAGAACGTGTTGAGAGGTCTGTGGTACGTGTACAGGCAATGTTCCGATCGAAGAAAGCACAACAAGAGTATAGCAGGATGAAGATGGCCCATAGTCAAGCAAAGCTGGAACTTGAATTAGAAGACCTTCTCAATTCTGATGTGGACATGTTAACAACAAAGACAGCATAG 2784 0.4239 MMAQNLTGQLVGSEIHGFHTLSDLDVGETLEEAKSRWLRPNEIHAILSNYKYFTIHVKPVNLPKSGTLVLFDRKMLRNFRKDGHNWKKKNDGKTVKEAHEHLKVGNEERIHVYYAHGQDCPSFVRRCYWLLDKSLEHIVLVHYRETQESQGSPITPVSSLGCGLTQSQGSPFTPVNSNSSSISDPTTSWIPSEDLDSGTNSAFTNGRSLEQKLHELNTLEWDDLVASHGNTSTIPNGAGNEPHFYQLNQSLMNGSVSNVAGSPAEVHSFGNSPPLESGTSNVSYSFQECVNPQKNHAITFGGVDSVDNTLVNEGLQSQNSFGNWMNSAISNTPCSVEASALESSIASSVHDPFSSLRMDNNQQPSLPEQVFHITELAPAWASSTEKTKVLITGYFHHDYQHFAKSNLVCVCGETIVPVEIVQVGVYRCWVLPHSPGFVNLYLSFDGHKPISQIVNFEYRTPILHDPAASMEDTYNWIEFRLQMRLSHLLFTTQKTLDSFSSKVSPTALEESKKFASKTLFISKSLQHFMKSSDANTTPFPQAKNTFFEIALKNKLREWLLERIVLRCKTAEYDAQGQGVIHLCTLLGYTWAITLFSWSGLSLDFRDKFGWTALHWAAYNGMEKMVATLLSCGARPNLVTDPTPQNPGGCTAADLAYMNGYDGLAAYLSEKCLVEQFNDMSLAGNISGSLETTTTDPVNPENLTEDQLYLKDTLAAYRTTADAAARIQAAFRERSLKLRYQSVQFSSPEEEARQIVAAMKIQHAFRNFETRKTMAAAVHIQHRFRTWKLRKEFLHMRRQAIKIQAAFRGFQVRRQYRKILWSVGILEKAILRWRLRRKGFRGLEVSPVEEMINEKHESDVEEEFFKTGRKQAEERVERSVVRVQAMFRSKKAQQEYSRMKMAHSQAKLELELEDLLNSDVDMLTTKTA 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02861 927 Gene3D - 771 819 - -
Vivi4g02861 927 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 25 904 - -
Vivi4g02861 927 SUPERFAMILY Ankyrin repeat 543 671 IPR036770 -
Vivi4g02861 927 ProSiteProfiles IQ motif profile. 795 819 IPR000048 GO:0005515
Vivi4g02861 927 Gene3D Immunoglobulins 367 462 IPR013783 -
Vivi4g02861 927 FunFam Calmodulin-binding transcription activator 5 367 463 - -
Vivi4g02861 927 Pfam CG-1 domain 32 145 IPR005559 GO:0003677
Vivi4g02861 927 ProSiteProfiles Ankyrin repeat profile. 608 640 IPR002110 GO:0005515
Vivi4g02861 927 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 719 822 IPR027417 -
Vivi4g02861 927 Gene3D - 515 671 IPR036770 -
Vivi4g02861 927 SMART ANK_2a 608 637 IPR002110 GO:0005515
Vivi4g02861 927 SMART ANK_2a 647 678 IPR002110 GO:0005515
Vivi4g02861 927 SUPERFAMILY E set domains 373 459 IPR014756 -
Vivi4g02861 927 ProSiteProfiles IQ motif profile. 772 801 IPR000048 GO:0005515
Vivi4g02861 927 FunFam calmodulin-binding transcription activator 5 538 678 - -
Vivi4g02861 927 ProSiteProfiles Ankyrin repeat region circular profile. 608 636 - -
Vivi4g02861 927 FunFam Calmodulin-binding transcription activator 2 771 819 - -
Vivi4g02861 927 Pfam IQ calmodulin-binding motif 797 816 IPR000048 GO:0005515
Vivi4g02861 927 Pfam IQ calmodulin-binding motif 774 792 IPR000048 GO:0005515
Vivi4g02861 927 SMART iq_5 718 740 IPR000048 GO:0005515
Vivi4g02861 927 SMART iq_5 874 896 IPR000048 GO:0005515
Vivi4g02861 927 SMART iq_5 794 816 IPR000048 GO:0005515
Vivi4g02861 927 SMART iq_5 771 793 IPR000048 GO:0005515
Vivi4g02861 927 SMART CG_1_2 29 147 IPR005559 GO:0003677
Vivi4g02861 927 ProSiteProfiles CG-1 DNA-binding domain profile. 26 152 IPR005559 GO:0003677
Vivi4g02861 927 Pfam Ankyrin repeats (3 copies) 550 637 IPR002110 GO:0005515
Vivi4g02861 927 MobiDBLite consensus disorder prediction 165 197 - -
Vivi4g02861 927 ProSiteProfiles IQ motif profile. 876 904 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02861 Vivi-Chr4 134862952 134869570 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02861 30 914 CAMTA Transcription Factor Family AT3G16940 54.781 0.0 924
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Vivi4g02861 CG-1 1.4e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02861 K21596 - gmx:100819198 1314.67