Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02848 ATGAATGGAGGCCAAACAGTTGCTATTGTTGGAGTTTCAGGTTCAGGAAAGAGCATTATAATATCTTTGATGCAGAGATTTTATGATCCAGTTGCGGGCCAAGTTTTACTGGACGGAAGGGATTTAAAGCTCTATAACTTGAGATGGTTGAGGAGCCACTTCGGTCTGATACAGCAGGAACCTATTATTTTCTCAACAACCATAAGGGATAACATTATATATGCAAGACACAATGTCGATGAAGCTGAGATAAAAGAAGCAGCAAGAATAGCAAATGCTCATCATTTTATTAGCAGTTTGCCTCACGGTTACGACACTCATGTTGGGATTAGAGGTTTAGACTTAACCCCAGGACAGAAACAGAAAATTCCAATTGCAAGAGTAAGATTGAAAAATGCACCTATCTTATTGTTGGATGAAGCAAGTTCATCAATTGAATCTGAGTCAAGCCGAGTGATACAAGAAACTCTAGACACACTAATAATGGGAAACAAAACCACTATTTTAATAGTGCAATATCCCAGTTCGCAGGCTGTGGCTACAGTTACAAAAGCTAGAATAAGATTGAAAGGAAAATGGCCCTACTCAATGATTGAGAGAATAAAGTACTACTGA 615 0.3837 MNGGQTVAIVGVSGSGKSIIISLMQRFYDPVAGQVLLDGRDLKLYNLRWLRSHFGLIQQEPIIFSTTIRDNIIYARHNVDEAEIKEAARIANAHHFISSLPHGYDTHVGIRGLDLTPGQKQKIPIARVRLKNAPILLLDEASSSIESESSRVIQETLDTLIMGNKTTILIVQYPSSQAVATVTKARIRLKGKWPYSMIERIKYY 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02848 204 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1 203 IPR003439 GO:0005524
Vivi4g02848 204 SMART AAA_5 3 192 IPR003593 GO:0016887
Vivi4g02848 204 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 2 173 IPR039421 -
Vivi4g02848 204 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 175 IPR027417 -
Vivi4g02848 204 Gene3D - 3 171 IPR027417 -
Vivi4g02848 204 Pfam ABC transporter 2 142 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02848 Vivi-Chr4 134573223 134573837 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02848 3 172 Calmodulin-binding Proteins AT2G36910 50.588 9.92e-55 185