Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02843 ATGGGAGTTGAGAAAGAAGGGACTAGAGGTGGAGGTAGTTTTTTCCACTTATTTGATTGGACCTCGAAATCGCGCAAGAAATTATTTGCATCCAAGTCAGATTTACCAGAGTCTTTGAAACAGGAAAGAAAATCCAACCACAATGGGGCTATGAGACATTCCTATCTGGTGGATGAAGACGAAAATGGCGTAGGGGAATTTGTTAGAGGAAGTTGTGATCATAGTTATGCTTCATCTGTTACAAGTGATGAAACATCTGGAACAAGAGCTCCAAATGTAGTTGCGAGGCTTATGGGATTGGATTCTTTGCCTACTTCCGGTTTCTCTGATCCCTACGCTTCTCCATATTTTGATACCAGATCCCTTCAAGATGATTCTCAGTTCCTTGGGAAAAATCACGAGGAATTGAGAATCTTGAAGGGGTCTGGTATAATGGAGGCTCCGCCTCAGAGGACAATTATTAGGCCAATTGAGAAGTTCCAGAAAGAAGTATTACCTCCGAAATCAGCTAAATCGATTCCTGTTACACACCATAAACTTTTGTCTCCTATTAAGAATCCTGGCTTTGTTTCGTCCAACAATGCTGCTTATATAATGGAGGCTGCTGCGAGAATTATCGAACCTGGATCCTCCCAAGCGAAGGCTAAAGCACATATGGCATCATCAACAGTCTCACTGAGGGTAAAAGATCTTAGAGATAAGTTAGATTCTTCGCAAAAAGGACCTCTAATTGGGACATCTTCCGTAGCTTTTAGGACTCGAGAGCTAAAAGAAAGAAGAGACATTTCTCAAAGAACAAGCAGGGTTTCAGAACCTTCGCAAAGGTCATCATCATCAGTCGAGTTGAATGCTGCGAAGTATTTAAAGGGACAATCTTTGAACAGAAGCTGGAATGGAACTGCGGAAACGTCCGTCAAGTCTCCTACATATGCAGAAGATTCTTCTTTGAAGAATAAGGGGAAATCTGCTTCTTTGAACAGAAGCTGGGATAGAACTGCGGAAACGTCCGTTAAGTCTCCTACTCACGCTGAAGAAGATTCTTCTTTGAAGAATAAGGGGAAATCGGCTTCTTTACACAGAAGCTGGGATGGAACTGCCGAAACATCAGTTAAGTCTCCTACACATGCAGAAGAAGAATCTTCTTTGAAGAATAAGGGGAAATCTGTTTCGCTTGCAATCCAAGCAAAGGTGAATGTTCAAAGAAGGGAAGGCTTGAGTTCTACCGGTGGCAGAAGTTTGATAAACCAAAAAGAGCATCTCGACACGAAATCAAATCAGCCACCTAAGGCAAATGCTCCGAAAAATTTGCATAGGAAATCTTCTGGCCAGAACTCTTCTAATATTCTCAGGCAGAATAATCTGAAACAGAACCATTCAATGGATATGAACGACAAATCATTACCATCTAAGCCATTGGTTTCCAACTCACAAGGTAGAAAAGTTACGGCTGGAGATTCTTCTTACGGACGGCATAGAAGTTCTAATGGTAAATCCACCGCAAAATCTAAAACCGGATTGAAAAAGTCAGCTGTGGAAGTGACGGATAGTGAAAACGAAATTCTATACACCCGCACAAACAATTTTCCTAGAAAGAAAAGGACTACAGACAAGGACTGGAATGATAGAGTTGTGGATAATTTGTTCATCGACAAAACTCCAAAGCCTGTTAAGCCTGAAGAAGTGAAAAAGAAAGACATGGATGTAATTTCCTTCACATTTACCACACCATTAACAAGGAGCAGCAATCCAGGTTTCGAGACACCTCGACAAAGTGGAAAGAATACTCATGATCTTTCATTGGATCAACGCATTAAAAGAGTGTTGCTCGACGCAGACAGTTCGAGGTCTCCAATAGGATATAATGTAATTGGTGGTGATGCCTTAGGAATACTTTTGGAACAGAAATTGAGGGAATTGACAAGTGGAGTTGAAAACTCATCTTCCAGTGATGTTTCTAAAGTGAGGCAAATTTCCAATTCTGCACCAATGTCAAATGATCAAGCAACAAACTTTAATATAGTAAACCTCAATCCAAAATTGCAGCTGAAGAAAGACCAAGATATGTCATTTTCGGACAGTCTAAGCAGTGGCCGTGGCTCTAACACATCCTTCACCAATCATCCAGAATCATCATTGAAACAACATAAATCATGGGGTGATGAGATGGAAACACTGTCATCCAATTGCCGACAACCAAGTCCTGTTTCAGTTCTTGAACCGTCTTTTTCAATCGAAAGTTGTGAATCCTCGATGAGCATGGACGTTACTAGTACCGAAGGAAGCAAGATGTTTTCATCTAATCAAGCTCAGGAGATCCATGGCTTTAACTTTTCGAGGAAATTCTATCCTAGTGAATCCGATGCAGAGTTATCTGATTCAGCTTCTTCAACCTCAACCAGGACTATGATAAAGAAGCACGCGGATACATTTTCGATGAAGTTTGGAAGATCATCAAGTACATGGGAGCTAGAATATGTGAAAGAGATACTATGCAATGTTGAGTTGATGTATATAGATTTTTCCCTCGGCCGATCACGCGAGGTTGTGAACTCTCATTTGTTCAATCAGTTGGAAAGCCGAAAGGGAGGTTACAAGAGCGACGATGAATCGAGGATAGAAAGGAAGGTTATATTCGATATTGTGAGTGAATGTTTGGATTTGAGATGCAGGAGTTATGTAGGAGGAGGATACAGAATGTGGACTAAAGGGTTTGAAATGGTGAGGAAAGATTGGTTGGCAAAAGATGTGTACAAGGAGATTTTGGGGTTGAGAGGGATGAGAGATTCAATGGTGGATGAACTTGTGGACAAGGATATGAGTAGCCAATATGGGAAGTGGTTGGATTATGAGGTTGATGCTTTTGAATTTGGTGAAGAAGTTGTGGATCAGATTTTTGATTCTTTGGTTGATGATGTTGTCGATGAAATGTTGCAAGTTTAA 2940 0.4088 MGVEKEGTRGGGSFFHLFDWTSKSRKKLFASKSDLPESLKQERKSNHNGAMRHSYLVDEDENGVGEFVRGSCDHSYASSVTSDETSGTRAPNVVARLMGLDSLPTSGFSDPYASPYFDTRSLQDDSQFLGKNHEELRILKGSGIMEAPPQRTIIRPIEKFQKEVLPPKSAKSIPVTHHKLLSPIKNPGFVSSNNAAYIMEAAARIIEPGSSQAKAKAHMASSTVSLRVKDLRDKLDSSQKGPLIGTSSVAFRTRELKERRDISQRTSRVSEPSQRSSSSVELNAAKYLKGQSLNRSWNGTAETSVKSPTYAEDSSLKNKGKSASLNRSWDRTAETSVKSPTHAEEDSSLKNKGKSASLHRSWDGTAETSVKSPTHAEEESSLKNKGKSVSLAIQAKVNVQRREGLSSTGGRSLINQKEHLDTKSNQPPKANAPKNLHRKSSGQNSSNILRQNNLKQNHSMDMNDKSLPSKPLVSNSQGRKVTAGDSSYGRHRSSNGKSTAKSKTGLKKSAVEVTDSENEILYTRTNNFPRKKRTTDKDWNDRVVDNLFIDKTPKPVKPEEVKKKDMDVISFTFTTPLTRSSNPGFETPRQSGKNTHDLSLDQRIKRVLLDADSSRSPIGYNVIGGDALGILLEQKLRELTSGVENSSSSDVSKVRQISNSAPMSNDQATNFNIVNLNPKLQLKKDQDMSFSDSLSSGRGSNTSFTNHPESSLKQHKSWGDEMETLSSNCRQPSPVSVLEPSFSIESCESSMSMDVTSTEGSKMFSSNQAQEIHGFNFSRKFYPSESDAELSDSASSTSTRTMIKKHADTFSMKFGRSSSTWELEYVKEILCNVELMYIDFSLGRSREVVNSHLFNQLESRKGGYKSDDESRIERKVIFDIVSECLDLRCRSYVGGGYRMWTKGFEMVRKDWLAKDVYKEILGLRGMRDSMVDELVDKDMSSQYGKWLDYEVDAFEFGEEVVDQIFDSLVDDVVDEMLQV 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02843 979 MobiDBLite consensus disorder prediction 298 336 - -
Vivi4g02843 979 MobiDBLite consensus disorder prediction 337 357 - -
Vivi4g02843 979 Pfam Domain of unknown function (DUF4378) 822 971 IPR025486 -
Vivi4g02843 979 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 338 975 - -
Vivi4g02843 979 MobiDBLite consensus disorder prediction 267 282 - -
Vivi4g02843 979 MobiDBLite consensus disorder prediction 298 387 - -
Vivi4g02843 979 MobiDBLite consensus disorder prediction 642 670 - -
Vivi4g02843 979 MobiDBLite consensus disorder prediction 400 514 - -
Vivi4g02843 979 Pfam DUF761-associated sequence motif 78 109 IPR032795 -
Vivi4g02843 979 MobiDBLite consensus disorder prediction 31 50 - -
Vivi4g02843 979 MobiDBLite consensus disorder prediction 685 732 - -
Vivi4g02843 979 MobiDBLite consensus disorder prediction 425 507 - -
Vivi4g02843 979 MobiDBLite consensus disorder prediction 685 712 - -
Vivi4g02843 979 MobiDBLite consensus disorder prediction 400 415 - -
Vivi4g02843 979 MobiDBLite consensus disorder prediction 257 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02843 Vivi-Chr4 134442321 134446562 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02843 387 977 TRM (TON1 Recruiting Motif) Superfamily AT3G58650 30.081 1.28e-47 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02843 - - vvo:131595259 1862.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g02843 4 134442321 134446562 Vivi4g02843 4 134442321 134446562 ECH
Vivi4g02843 4 134442321 134446562 Vivi4g02843 4 134442321 134446562 PCT