Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi4g02841 | ATGGAACTAAGTATCATGTTATGTTTTTTGTTTAGTTCTTCTATTCTCTTCATTGTTCTCTTTAGAATATTCATCAAACAATTTGTCTCCAAAAGACAACACTTGCCACTTCCACCTGGTTCAATGGGTTATCCTTACATAGGAGAAACTTTTCAACTTTATTCTCAAGACCCAAATGTTTTCTTTGCATCAAAAATCAAAAGGTTTGGTTCTATGTTCAAGTCACACATTTTGGGGTGTCCTTGTGTGATGATTTCAAGCCCTGAAGCTGCTAAATTTGTGTTGAATAAAGCTCAACTTTTCAAGCCAACATTTCCTGCTAGCAAAGAGAGGATGTTGGGAAAACAAGCTATCTTTTTTCATCAAGGAGAGTATCATGCTAACTTGAGAAGACTTGTTCTTCGCACTTTCATGCCGGAAGCCATCAAGAATATTGTTCCTGACATTGAATCCATTGCTCAAGATTCTCTTAAATCAATGGAAGGAAGATTAATCACCACTTTCCTTGAAATGAAAACGTTCACATTCAATGTTGCTTTACTATCAATTTTTGGAAAAGATGAAGTTCACTACAGAGAGCGATTGAAGCAGTGTTACTACACACTTGAAAAAGGGTACAATTCAATGCCAATAAACCTTCCTGGAACACTCTTCCACAAAGCTATGAAAGCAAGGAAAGAGCTAGCACAGATCTTGGCTGAGATAATCTCAAGTAGGAGAGAGAAGAAGCAAGATTTCAAAGACTTGTTAGGGTCATTCATGGATGAGAAATCAGGACTGAGTGATGAACAGATAGCAGATAATGTGATTGGAGTTATTTTTGCAGCTCGTGATACCACAGCTAGTGTGCTTACGTGGATTGTCAAGTACCTTGGTGAAAATATCAATGTACTAGAATCAGTGATTGAGGAACAAGAATCTATATTGAGGAACAAGGAAGAAAATGGTGAAGAAAAGGGTCTTAAATGGGAAGATACTAAGAAGATGGTTATAACTTCTAGGGTTATTCAAGAGACTCTTAGAGTTGCTTCAATTTTGTCTTTCACTTTTAGAGAAGCTGTTGAAGATGTTGAATATCAAGGGTATCTTATACCAAAAGGGTGGAAAGTATTGCCTTTGTTTAGGAATATACACCATAGTCCAAACAACTTTAAAGATCCAGAAAAGTTTGATCCTTCAAGATTTGAGGTTGCTACAAAGCCCAATACTTTTATGCCATTTGGAAGTGGGATCCATGCTTGTCCTGGCAATGAATTAGCAAAGATGGAGATTTTGGTCCTTTTACATCATCTTACCACAAAATACAGGTGGTCTGTGGAAGGTACAAAGGATGGGATTCAATATGGTCCCTTTGCTCTTCCCCAAAATGGATTGCCCATCACACTATATCCAAAAAAATAG | 1401 | 0.3712 | MELSIMLCFLFSSSILFIVLFRIFIKQFVSKRQHLPLPPGSMGYPYIGETFQLYSQDPNVFFASKIKRFGSMFKSHILGCPCVMISSPEAAKFVLNKAQLFKPTFPASKERMLGKQAIFFHQGEYHANLRRLVLRTFMPEAIKNIVPDIESIAQDSLKSMEGRLITTFLEMKTFTFNVALLSIFGKDEVHYRERLKQCYYTLEKGYNSMPINLPGTLFHKAMKARKELAQILAEIISSRREKKQDFKDLLGSFMDEKSGLSDEQIADNVIGVIFAARDTTASVLTWIVKYLGENINVLESVIEEQESILRNKEENGEEKGLKWEDTKKMVITSRVIQETLRVASILSFTFREAVEDVEYQGYLIPKGWKVLPLFRNIHHSPNNFKDPEKFDPSRFEVATKPNTFMPFGSGIHACPGNELAKMEILVLLHHLTTKYRWSVEGTKDGIQYGPFALPQNGLPITLYPKK | 466 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi4g02841 | 466 | PANTHER | CYTOCHROME P450 26 | 33 | 439 | - | - | |
| Vivi4g02841 | 466 | FunFam | Abscisic acid 8 | 27 | 464 | - | - | |
| Vivi4g02841 | 466 | Pfam | Cytochrome P450 | 38 | 456 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vivi4g02841 | 466 | SUPERFAMILY | Cytochrome P450 | 32 | 464 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vivi4g02841 | 466 | PRINTS | E-class P450 group I signature | 404 | 414 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vivi4g02841 | 466 | PRINTS | E-class P450 group I signature | 414 | 437 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vivi4g02841 | 466 | PRINTS | E-class P450 group I signature | 66 | 85 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vivi4g02841 | 466 | PRINTS | E-class P450 group I signature | 333 | 351 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vivi4g02841 | 466 | PRINTS | E-class P450 group I signature | 264 | 281 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vivi4g02841 | 466 | PRINTS | E-class P450 group I signature | 284 | 310 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vivi4g02841 | 466 | PRINTS | E-class P450 group I signature | 373 | 397 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vivi4g02841 | 466 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 407 | 416 | IPR017972 | GO:0005506|GO:0016705 | |
| Vivi4g02841 | 466 | Coils | Coil | 295 | 315 | - | - | |
| Vivi4g02841 | 466 | PRINTS | P450 superfamily signature | 405 | 414 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vivi4g02841 | 466 | PRINTS | P450 superfamily signature | 275 | 292 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vivi4g02841 | 466 | PRINTS | P450 superfamily signature | 414 | 425 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vivi4g02841 | 466 | PRINTS | P450 superfamily signature | 334 | 345 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vivi4g02841 | 466 | CDD | CYP90-like | 66 | 464 | - | - | |
| Vivi4g02841 | 466 | Gene3D | Cytochrome P450 | 27 | 464 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vivi4g02841 | Vivi-Chr4 | 134377415 | 134380563 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Vivi4g02841 | 1 | 460 | Cytochrome P450 | AT4G19230 | 70.779 | 0.0 | 674 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi4g02841 | K09843 | - | gmx:100170674 | 816.224 |