Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02824 ATGGCCTCGAACTTTTGTAGCCATCGTTGCTTCTTCTTCATCGTCGTGGTTTTATCAATCTTGGCCACAACTCCGTCAACGTCTCAGCAGCAAACGTCTGATTCATGCAACGGAATATTCATATCATACACATACACCGGAGGCAAAAAGCTTACACCGAACCTGACGAACTCAGCATCCCAACCATCCCGATTTGAGTCGACACTGACAGTGCTCAACAACGGGCTCCAAGAGCTGAAGTCTTGGAAGGTGTTTGTCGGGTTTCAGCACGGAGAATGGTTGGTCTCTGCATCAAATGCGGTGCTCGTGGACGGGAGGAGCTTCCCCGGGGCAGTTGGAAACGGCACCGTTTTAGCAGGGTCATCTGTAACAGATTTGAAGACAGCAGCTGCGACTGCAGGGGACTTAACTCAGATGCAGGTTAAGGTAGATATGGTGGGGACAGTGGTGGGAGTTGCACCACCCGGCGTGCCAATGCCGTCTACCATAAACCTTGCTAATGATGGATTCATTTGTGGTAACTCTTCTTCAGGGAACAATGAAACTCATGTATGTTGCACAAGTGATCCCAATTACAAGACAAAAATCATCACAGATGAAAAATTTCTACCTAGACAGAATGGTGATCTTACCATAATGTATGATGTGATCAAAGCATACGATTCCAATTACTTGGCAGAGGTAACACTTTCAAACCACAACCCTCTCGGCCGTCTCGACGGTTGGAAATTAAGCTGGAATTGGACAAATGATGAATTCATACACACAATGAAAGGTGCTCATCCATCAATTATAGATTCTTCTAACTGTGTTTTTGGCTCACAAGGTGAATATTACAAGGAACTTGATTTTGCAAATGTAATGAGTTGTGAAAAAAGACCAACAATAATGGATCTACCTCCAACAAGGTTCAATGATTCACAAATTGGTAAGATACCATTTTGTTGTAGAAATGGTACTTTGTTACCACCAAATATGGACCCTAGCATGTCGATTTCAAGGTTCCAAATGCAAGTTTATAAAATGCCGCCACATCTCAATCGGTCAAACCTTACACCACCACAAAATTGGGAGATTAAAGGTTCTATAATCAACCCTGATTACAAATGCGGCGGCCCGATTAGGTTTAGTCCTAGTCAGTTTCAAAATCCAACAGGGTTACCTTCAAACATATCTTCAATTGCAAGTTGGCAAGTTGTGTGCAACATAACAAAGTCATTGAAAAGTGATTCTCCAAAATGCTGTGTCTCGTTTTCAGCTTTTTATAATGAATCAGTTATTCCTTGTAACACATGTGCATGTGGATGTCATAGTAATCAAAAGAGAACATGTAGTGTTAGTAAACCAGCTATGTGGCTTCCATCAAAAGCACTTCTTGTACCATTTGAGAATAGAAGTGAAATGGCACATGATTGGGCTAGTATGCAAAAACTACAAGTACCTAACCCTATTCCATGTGGTGATAACTGTGGTGTGAGCATAAATTGGCATGTAAATACAGATTATGAAAAAGGTTGGACCGCAAGGATCACGATTTTTAACTGGGGTGAGACGAATTTCGCCGATTGGTTTGCTGCGGTTCAGATGGACAAAGGTGCAATCGGTTTTGAGGAAATGTATTCATTCAATGGAGGCTTGTTAGAGAGATTAAACACTACAATATTCATGCAAGGTAAGAAAGGACTGAACTTTCTTGTAGCAGAAGCAAATGGGTCGAACCCTCGAAAAGATCCGAGGGTTCCGGGGAAACAGCAGTCAGTAATCTCATTCAGAAAGGAAAAAAATGATGAAATCAATGTAGTAGGTGGTGATGGTTTTCCTAGTAAAGTTTTCTTCAATGGAGAGGAATGCTCTCTTCCATCAGTGTTTCCAAGCAATGGTTTGAGGAATGAACTTTCTGTATATACTATTCTGATCCTAATATTGTTGTCAATCATCTTGATGCAACAATGGTGA 1956 0.4151 MASNFCSHRCFFFIVVVLSILATTPSTSQQQTSDSCNGIFISYTYTGGKKLTPNLTNSASQPSRFESTLTVLNNGLQELKSWKVFVGFQHGEWLVSASNAVLVDGRSFPGAVGNGTVLAGSSVTDLKTAAATAGDLTQMQVKVDMVGTVVGVAPPGVPMPSTINLANDGFICGNSSSGNNETHVCCTSDPNYKTKIITDEKFLPRQNGDLTIMYDVIKAYDSNYLAEVTLSNHNPLGRLDGWKLSWNWTNDEFIHTMKGAHPSIIDSSNCVFGSQGEYYKELDFANVMSCEKRPTIMDLPPTRFNDSQIGKIPFCCRNGTLLPPNMDPSMSISRFQMQVYKMPPHLNRSNLTPPQNWEIKGSIINPDYKCGGPIRFSPSQFQNPTGLPSNISSIASWQVVCNITKSLKSDSPKCCVSFSAFYNESVIPCNTCACGCHSNQKRTCSVSKPAMWLPSKALLVPFENRSEMAHDWASMQKLQVPNPIPCGDNCGVSINWHVNTDYEKGWTARITIFNWGETNFADWFAAVQMDKGAIGFEEMYSFNGGLLERLNTTIFMQGKKGLNFLVAEANGSNPRKDPRVPGKQQSVISFRKEKNDEINVVGGDGFPSKVFFNGEECSLPSVFPSNGLRNELSVYTILILILLSIILMQQW 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02824 651 PANTHER COBRA-LIKE PROTEIN 7 27 646 - -
Vivi4g02824 651 Pfam COBRA-like protein 224 404 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02824 Vivi-Chr4 133779322 133781386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02824 36 635 COBRA Gene Family AT4G16120 62.706 0.0 806
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02824 - - vum:124836920 946.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g02824 4 133779322 133781386 Vivi4g02824 4 133779322 133781386 ECH
Vivi1g01062 1 22599505 22602006 Vivi4g02824 4 133779322 133781386 PCT