Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02807 ATGGGTTGCTTTGGCTTCTGCAAAGAGAATGATTCTTATACTACTGCTGACAGAGGAAACTTCATGCAAAACAATCCCAATGCAGGGAACTCTAGTTATCATGGAAGACACACGACAGTAACCATTCCCCAGCCTATAAATCTCCAACCGATTTCTGTTCCTTCCATTACAATAGATGAATTGAAGTCTGTCACTGATCCGCTGTCGCACGCGGATCAAAAACGAGTTGTTTTGAATAAAACTGTAGATAGCGACAAGCGACTCGAATATCGTCTCTCAAGGATTCTTATCGTTCCTTCCATTGTCGAGCTTCTTACTTACTGTGTTTACTGCCCTTTCCGTGCCCTTGCTTACGAGTATGTTCCAAATGGATCCTTTCATGACATTCTACATGGACGCAAAGGTGTAAAGGGTGCAGAACCTGGTCAAGTTTTATCATGGGCTCAAAGAGTTAAAATCGCTGTTGGAACAGCCAGAGGACTTGAATATCTTCATGAAAAGGCAGAAACATGTTGCTATGAATGTCAGTTCATGATGGTGGCAGTCAATTGA 552 0.4239 MGCFGFCKENDSYTTADRGNFMQNNPNAGNSSYHGRHTTVTIPQPINLQPISVPSITIDELKSVTDPLSHADQKRVVLNKTVDSDKRLEYRLSRILIVPSIVELLTYCVYCPFRALAYEYVPNGSFHDILHGRKGVKGAEPGQVLSWAQRVKIAVGTARGLEYLHEKAETCCYECQFMMVAVN 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02807 183 Gene3D Transferase(Phosphotransferase) domain 1 63 173 - -
Vivi4g02807 183 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 7 170 - -
Vivi4g02807 183 SUPERFAMILY Protein kinase-like (PK-like) 80 166 IPR011009 -
Vivi4g02807 183 Pfam Protein tyrosine and serine/threonine kinase 95 167 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02807 Vivi-Chr4 133524136 133528808 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02807 23 169 Receptor kinase-like Gene Family AT5G49760 29.412 5.79e-14 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Vivi4g02807 PK_Tyr_Ser-Thr 2.4e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02807 K13436 - gmx:547596 212.231