Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02752 ATGGAACAAGAAGAATTTGATTACAAAGCCAAATTGGTATTAGATATATGTTCCATTTCCAACCATTCAATTCGTTGTGTTCATACATTTTTCTCAAGTGCACCTTTCGTTGATTGGTATTGCATTCTTGGTGTTGAAGAAAATGCTGGGCTAAATACCATTCGTAAGAAATATCATAAACTTGCCTTGCAACTTCATCCAGATAAGAATAAACACCCTAAAGCTGAAATTGCATTCAAACTTGTCTCTCAGGCATATACAATACTATCTGATGCTGCAAAAAGAAAAACTTTCAACTTAGAAAGAAACAGAAGCTTCTGCATTGAGTGCAATAGAATCCCCTATAAACCCAACATTCTCCCTACCAATTCCAATGCTTCAAGTTTCAAGCCATGCAACATTACCAACAAATCAATATCTAGTAAAGTTAGAAGAAATATTTTGGACATGAGAGAAAGATTGAAGCAAGAGGCTAAGGTGATAGAGAATTGTCTGAGGACAAAGTCAGTGTCTAAAAAAGAAAGTCCTGTTTTTAATCCATCAAACTACATATACCAAACTAACCCTCATCCTAGGAGCAATGTTTACAAAAATTCCAAGACATTTTGGTACTTACAGAAAGAAAATGCAGTGCGCCGCGACAAGGGAGACGCGAAAGATAAGTATAGTTCACCTATTTTTGAGGTCAAGTAG 693 0.3579 MEQEEFDYKAKLVLDICSISNHSIRCVHTFFSSAPFVDWYCILGVEENAGLNTIRKKYHKLALQLHPDKNKHPKAEIAFKLVSQAYTILSDAAKRKTFNLERNRSFCIECNRIPYKPNILPTNSNASSFKPCNITNKSISSKVRRNILDMRERLKQEAKVIENCLRTKSVSKKESPVFNPSNYIYQTNPHPRSNVYKNSKTFWYLQKENAVRRDKGDAKDKYSSPIFEVK 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02752 230 Gene3D DnaJ domain 37 158 IPR036869 -
Vivi4g02752 230 ProSiteProfiles dnaJ domain profile. 38 102 IPR001623 -
Vivi4g02752 230 SUPERFAMILY Chaperone J-domain 28 101 IPR036869 -
Vivi4g02752 230 SMART dnaj_3 37 94 IPR001623 -
Vivi4g02752 230 PRINTS DnaJ domain signature 74 94 IPR001623 -
Vivi4g02752 230 PRINTS DnaJ domain signature 40 58 IPR001623 -
Vivi4g02752 230 PRINTS DnaJ domain signature 58 73 IPR001623 -
Vivi4g02752 230 PANTHER BNAC03G44070D PROTEIN 9 133 - -
Vivi4g02752 230 CDD DnaJ 38 91 IPR001623 -
Vivi4g02752 230 Pfam DnaJ domain 38 99 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02752 Vivi-Chr4 131057506 131058853 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02752 4 106 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.628 5.10e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02752 - - gmx:100781104 291.582