Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02751 ATGGCGACGGAGAAGTTAATGGCCGGCGGTGGCCCGCGCTACGTTCAGATGAAATCGTCTCCGCCATCGTCTCCTCCGACGGCTGATATTTCATCAAGTCTATCGTTTCGACACAGTGCCGCCGGTGATATGTTTCGGATTTTCGATGAATTGCCGAAAGCAACTATCATATCTGTCTCTCGTCCTGATCCTAGTGATATCAGTCCTATGCAACTCTCTTACACCATTGAGGTTGAGTATAAACAGTTCAAGTGGGAGCTAGTGAAGAAAGCTCATCAAGTATTTATTTTGCATTTTGCGTTAAAGAAGCGTGTCTTTATTGAGGAAATTCATGAGAAGCAAGAGCAGGTTAAAGAATGGCTTCACAATCTAGGAATTGGAGAACACGCTACTATGGAACAAGATGACGATGAAGGTGACGATGAAACAGTTCCTTTACAAACTGATGAAAGTGCTAAAAACAGAGACGTTCCATCTAGTGCTGCTCTTCCAATTATACGGCCAGCTTTAGGAAGACAGCATTCTATTGCAGACAGGGCAAGAAGTGCAATGCAAGGGTATCTGAATCACTTTTTGGGAAATATTAGTATTGTTAACTCTCCTGAGGTTTGCAAGTTTTTGGAGGTGTCAATGTTATCTTTTTCACCTGAATATGGCCCTAAGCTGAAGGAGGAATATGTGATGGTGAAGCATCTACCTAAAATTAAGAAGGATGAAGACTCCCGAAAGTGTTGTTTGTCCGACTGTTTTAATTGTTGTAATGACAATTGGCAGAAGGTGTGGGCTGTACTGAAACCTGGATTCTTGGCATTGCTGGCACATCCTTTTGATAAACAGCCGTTGGACATTATTGTTTTTGATGTACTGCCTGGCTCAGATGCCAACGGGGATGGCCGTTTATCATTAGCGATTGAAATGAAGGAACGGAATCCTTTACGGCATTCGTTCAAGGTGACTTGTGGAATCCGAAGTATTAGAATTAGAAGTAAAAGTAGTAGTAAAGTTAAAGACTGGGTCGCTGCAATTAATGATGCTGGACTCAGACCTCCTGAAGGCTGGTGTCATCCTCATCGCTATGGTTCTTTTGCTCCTCCGAGAAGCTTAAATGAAGATGACAGTCAAGCCCAGTGGTTTGTAGACGGGCAATCAGCATTTGAGGTCATTGCTTCTTCAATTGAAGATGCCAAATCTGAGATATTTATCTGTGGGTGGTGGCTGTGCCCAGAACTCTACCTACGGCGACCTTTCCAAACTCATGCTTCATCAAGGCTTGATAATCTGTTGGAAGCAAAAGCTAAGGAAGGGGTTCAGATTTACATTCTTCTCTACAAAGAGGTGGCTCTTGCTTTGAAAATCAACAGTGTCTATAGCAAGAAAAAGCTTCTTAGCATTCATGAGAATGTGAGGGTATTACGCTATCCTGACCACTTTTCTACTGGTGTTTACCTGTGGTCACACCATGAAAAACTTGTCATTGTTGATAATCATATTTGCTTCATCGGGGGACTGGATTTATGCTTTGGTCGATATGACTCGCCTGAGCATAAGGTGGGAGATATCCCTCCACTAATTTGGCCTGGAAAGGACTATTACAACCCAAGAGAATCTGAGCCAAATTCATGGGAAGACACCATGAAAGATGAATTGGAACGTGAAAAATATCCTCGTATGCCTTGGCATGATGTTCATTGTGCCCTTTGGGGACCACCTTGTCGTGACATTGCTAGGCACTTTGTTCAGCGATGGAATTATGCTAAGAGGAACAAAGCTCCATATGAGCAAACAATACCACTACTCATGCCTCAACATCATATGGTTATTCCCCATTACTTGGGAAGCAGTGAGACACCGATCGAAATTAAAAACACTGTCAATGATAGAGCCCTCAAGAGAGAAGATTCATTTTCCTCATCTTCCCAAGACCAAGATATTCCTCTACTCCTGCCTCAAGAGCCAGGTGGGTTGGATGATCCTGAAGGAGACCCAAAACCAAATGGGCTAATCTCCTTTCTACATCACCTTGACAAGCCTAGAAGGATCAGCAGTGGCCTTCCTTTCTCATTCAGAAGATCCAAAGTTGCAGCAGTTGGTCCGGATACACCAATGAAGGGTTTTGTTGATGATCTTGACTCTGTGCATTGTCATGAGAAAACTGCTCATGATAGAGTGGCTCACGTTGATTCACAAAATACAGATCTTGAATGGTGGGAAACACAAGAACGGGGTGATCAGGGAGGTTTTGCAGATGATTCTGGACAAATTGGTCCTCGAGCTTCCTGCCGTTGCCAGGTTATTAGGAGCGTAAGTCAGTGGTCAGCTGGAACAAGCCAAACTGAAGAGAGCATCCACAATGCTTATTGCTCCCTCATTGAGAAATCTGAATACTTCATCTACATTGAGAATCAGTTTTTTATCTCAGGTCTTTCTGGAGATGATATGATACGTAATCGTGTGTCAGAAGCTTTATATCGGCGGATTAAGCGAGCTTATAATGACAAAAAAACTTTCAGGGTTATAGTCGTCATACCACTCCTTCCTGGATTCCAGGGGGGGCTTGATGATGGTGGGGCAGCATCAGTGAGAGCTATAATGCATTGGCAGTATCGAACCATTTGCAGAGGGCAGAATTCTATCATACATAATCTTTATCAGCTTCTTGGTTCCAAAGTACATGAATACATCTCCTTTTACGGCTTGAGGAATTATGGTAAACTCTCTGATGGTGGTCCTGTGGCAACCAGCCAGGTGTACGTCCACAGTAAAATCATGATTATTGATGATTGTATAAGTTTGATTGGATCTGCTAATATTAATGATAGGAGCTTACTCGGCTCCCGGGATTCTGAGATTGGTGTAGTTATAGAAGACAAAGAGTTGATTGATTCATATATGGATGGAAAGCCTTGGAAGGCAGGGAAGTTTTCTTTGAGTCTCCGATTATCGTTATGGTCTGAACACTTAGGTCTCCCCACAGGAGAGGTCAATCAAATAATGGACCCCGTTATTGAGTCTACATACAAGGATATTTGGATGGCAATAGCAAAGACAAATACTGCAATTTATCAGGATGTATTCTCCTGTGTACCTAATGATCTGATACACACTAGACTGGCTTTCAGACAAAGCGTGGCTTTATGGAAAGAAAAAATTGGACACACTACAATTGATTTAGGAATAGCCCCAGAAAAACTAGAATCCTATCAGGATGGAGATATCAAGAACACTCATCCCATGGAGAGATTAGCATTAGTAAAGGGTCATCTTGTTTCTTTTCCCTTGGAATTCATGTCTCAGGAAAGTCTAAGACCTGCCTTTAATGAAGGCGAATACTATGCTGCTCAAGTTTTCCATTGA 3354 0.4258 MATEKLMAGGGPRYVQMKSSPPSSPPTADISSSLSFRHSAAGDMFRIFDELPKATIISVSRPDPSDISPMQLSYTIEVEYKQFKWELVKKAHQVFILHFALKKRVFIEEIHEKQEQVKEWLHNLGIGEHATMEQDDDEGDDETVPLQTDESAKNRDVPSSAALPIIRPALGRQHSIADRARSAMQGYLNHFLGNISIVNSPEVCKFLEVSMLSFSPEYGPKLKEEYVMVKHLPKIKKDEDSRKCCLSDCFNCCNDNWQKVWAVLKPGFLALLAHPFDKQPLDIIVFDVLPGSDANGDGRLSLAIEMKERNPLRHSFKVTCGIRSIRIRSKSSSKVKDWVAAINDAGLRPPEGWCHPHRYGSFAPPRSLNEDDSQAQWFVDGQSAFEVIASSIEDAKSEIFICGWWLCPELYLRRPFQTHASSRLDNLLEAKAKEGVQIYILLYKEVALALKINSVYSKKKLLSIHENVRVLRYPDHFSTGVYLWSHHEKLVIVDNHICFIGGLDLCFGRYDSPEHKVGDIPPLIWPGKDYYNPRESEPNSWEDTMKDELEREKYPRMPWHDVHCALWGPPCRDIARHFVQRWNYAKRNKAPYEQTIPLLMPQHHMVIPHYLGSSETPIEIKNTVNDRALKREDSFSSSSQDQDIPLLLPQEPGGLDDPEGDPKPNGLISFLHHLDKPRRISSGLPFSFRRSKVAAVGPDTPMKGFVDDLDSVHCHEKTAHDRVAHVDSQNTDLEWWETQERGDQGGFADDSGQIGPRASCRCQVIRSVSQWSAGTSQTEESIHNAYCSLIEKSEYFIYIENQFFISGLSGDDMIRNRVSEALYRRIKRAYNDKKTFRVIVVIPLLPGFQGGLDDGGAASVRAIMHWQYRTICRGQNSIIHNLYQLLGSKVHEYISFYGLRNYGKLSDGGPVATSQVYVHSKIMIIDDCISLIGSANINDRSLLGSRDSEIGVVIEDKELIDSYMDGKPWKAGKFSLSLRLSLWSEHLGLPTGEVNQIMDPVIESTYKDIWMAIAKTNTAIYQDVFSCVPNDLIHTRLAFRQSVALWKEKIGHTTIDLGIAPEKLESYQDGDIKNTHPMERLALVKGHLVSFPLEFMSQESLRPAFNEGEYYAAQVFH 1117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02751 1117 PIRSF PLD_euk 608 1117 IPR016555 GO:0004630|GO:0006654|GO:0048017
Vivi4g02751 1117 PIRSF PLD_euk 50 615 IPR016555 GO:0004630|GO:0006654|GO:0048017
Vivi4g02751 1117 Gene3D Endonuclease Chain A 715 973 - -
Vivi4g02751 1117 Pfam Phospholipase D Active site motif 482 509 IPR001736 GO:0003824
Vivi4g02751 1117 SUPERFAMILY Phospholipase D/nuclease 756 965 - -
Vivi4g02751 1117 Gene3D - 236 346 IPR011993 -
Vivi4g02751 1117 CDD PLDc_vPLD1_2_yPLD_like_2 774 958 - -
Vivi4g02751 1117 CDD PLDc_vPLD1_2_yPLD_like_1 375 519 - -
Vivi4g02751 1117 SMART PH_update 221 349 IPR001849 -
Vivi4g02751 1117 Gene3D Endonuclease Chain A 366 605 - -
Vivi4g02751 1117 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 914 941 IPR001736 GO:0003824
Vivi4g02751 1117 SUPERFAMILY Phospholipase D/nuclease 329 602 - -
Vivi4g02751 1117 FunFam Phospholipase 748 968 - -
Vivi4g02751 1117 Pfam PLD-like domain 787 963 IPR025202 -
Vivi4g02751 1117 MobiDBLite consensus disorder prediction 129 153 - -
Vivi4g02751 1117 SUPERFAMILY PH domain-like 254 345 - -
Vivi4g02751 1117 MobiDBLite consensus disorder prediction 631 663 - -
Vivi4g02751 1117 CDD PH_PLD 198 345 - -
Vivi4g02751 1117 PANTHER PHOSPHOLIPASE D 171 1107 IPR015679 -
Vivi4g02751 1117 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 482 509 IPR001736 GO:0003824
Vivi4g02751 1117 MobiDBLite consensus disorder prediction 1 30 - -
Vivi4g02751 1117 SMART pld_4 914 941 IPR001736 GO:0003824
Vivi4g02751 1117 SMART pld_4 482 509 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02751 Vivi-Chr4 131032060 131052739 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02751 1 998 Phospholipase D Gene Family (Wang group) AT3G16785 71.884 0.0 1389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02751 K01115 - gmx:100780514 2008.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g02751 4 131032060 131052739 Vivi4g02751 4 131032060 131052739 ECH