Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02743 ATGGCAAGTCCTGACCAAATGAAAAGGTTTTCACTTCTTGGTGTCTCATGCATTCTTCTTGTCACTGTCGTCAGCGCCGCCTACGGCACACAAGGCCAACAGAATGTTGGCAAGCTTTGTGAATCAATGCAGTACCAAGAAACCTGCCACAAGAGTCTTGAGAAGGCGTCGGGCCAAACGACCGATGTTAAAGAGCTTTTGAAAGCCGCATTCAATGCAACATCAGCGGAGTTGTTGAAACATATTAACAATTCGACTCTCTATCACGAGTTGGCGAAGGACAACATGACAAAACAAGCAATGGATGTTTGCAATGAGGTTTTGAATTACGCTGTTGATGGAATCTCTAAATCAGTCGGTAGAATCGATAACTTTGATTTGAGTAAGTTGAATGAATATGGTTATGATCTCAAGGTTTGGTTAACCGGTACACTTTCGCATCAACATACATGTTTGGACGGTTTCGAGAACTCAACAACGAAAGCCGGTGAAACAATGGCTAAGATTTTGAATGCTTCTTTGCAATTAACTAACAATGCTATTGACATGATTAATGTTGCTTCTGGAATGGCTAAGGGTCTTGGCGAAAACACGAATACTGGTAAAAGGAATCTTTTGTCTCTTGAATCGGAGAAACTTGTCGATGGTTTTCCTTCATGGGTTAGCGAAGGACAACGACGTCTTCTAGCCGATGAACCCGTTAAGCCAAATGCTGTTGTCGCGCAAGACGGTAGTGGACAGTTTAAGACAATTGGTGATGCTCTTAAGACTGTTCCTGCTGATAATGCACAGCCTTTTGTTATTCATGTTAAGGAAGGTGTTTATAAGGAGACTGTTAATGTTCCTTTGCAACAGACTTTTGTTACCCTCATCGGCGATGGTCCTACCAAGACCAAAATCACCGGAAGCCTCAACACAGTTGATGGTTATATCGCTTACAACACCGCAACCGTCGGTGTAAATGGTGCAAATTTCATGGCAAAGGATATCGGGTTCGAGAACACAGCCGGGGTAGATAAACATCAAGCAATAGCACTCCGCATAACAGCAGACAAAGCAATCTTATACAACTGTCAAATGGACGGTTTCCAGGCCACGCTCTTCGCCGAATCCCAACGCCAATTCTACCGCGACTGCACCATCTCCGGCACAATCGACTCCATCTACGGCGACGCCTTTGGAGTTTTCCAAAACTGCAAACTAGTCGTTAGAAAACCAGATGAGGAACAGGAATGCACCGTAACAGCCAGCGGAAGAGTCAAATCCGACAGCGCAAGCGCTCTCATTTTCCAATCCTGTCACTTCACAGGTGAACCAGAACTAGCATCAATAACACCCAAAATCGCTTACCTCGGAAGACCATGGAAGGCGTACGCCAAAGTCGTCATAATGGACTCAACCATCGATGACATTTTCTCCGAAGAAGGTTACATGCCATGGATGGGAAAAATGTTCCTCGACACATGTACTTATTACGAGTATAACAATAAAGGTCCTGGTGCTGACACAAAAGGAAGAGTTAAATGGCCCGGTGTTAAAACTATAACCGCGACCGAAGCAGCTGATTTCTACGCTGGAAAATTCTTCGAGATTGCTAATTCAACCGAACGCGATTCTTGGATTGTGAAGTCTGGTGTTCCTTATTCACTTGATCCTTCACATGCTAGCAGTAATGAAGGCATTAAGGCTGAGGCCGGAAGTAGTAATCCGGGGGCTGGCAGTCATTCTGGAGCTACAAGAATGGAGACATTTTACAGCGGCTTTTTCATAGCAGCTGTATATTTGTTGGCAAATATGTGGATGTAA 1806 0.4435 MASPDQMKRFSLLGVSCILLVTVVSAAYGTQGQQNVGKLCESMQYQETCHKSLEKASGQTTDVKELLKAAFNATSAELLKHINNSTLYHELAKDNMTKQAMDVCNEVLNYAVDGISKSVGRIDNFDLSKLNEYGYDLKVWLTGTLSHQHTCLDGFENSTTKAGETMAKILNASLQLTNNAIDMINVASGMAKGLGENTNTGKRNLLSLESEKLVDGFPSWVSEGQRRLLADEPVKPNAVVAQDGSGQFKTIGDALKTVPADNAQPFVIHVKEGVYKETVNVPLQQTFVTLIGDGPTKTKITGSLNTVDGYIAYNTATVGVNGANFMAKDIGFENTAGVDKHQAIALRITADKAILYNCQMDGFQATLFAESQRQFYRDCTISGTIDSIYGDAFGVFQNCKLVVRKPDEEQECTVTASGRVKSDSASALIFQSCHFTGEPELASITPKIAYLGRPWKAYAKVVIMDSTIDDIFSEEGYMPWMGKMFLDTCTYYEYNNKGPGADTKGRVKWPGVKTITATEAADFYAGKFFEIANSTERDSWIVKSGVPYSLDPSHASSNEGIKAEAGSSNPGAGSHSGATRMETFYSGFFIAAVYLLANMWM 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02743 601 CDD PMEI-like_3 39 189 - -
Vivi4g02743 601 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 187 IPR035513 -
Vivi4g02743 601 MobiDBLite consensus disorder prediction 555 574 - -
Vivi4g02743 601 NCBIfam pectinesterase inhibitor domain 15 186 IPR006501 GO:0004857
Vivi4g02743 601 SMART PMEI_2 31 183 IPR006501 GO:0004857
Vivi4g02743 601 FunFam Pectinesterase 4 234 552 - -
Vivi4g02743 601 Gene3D - 234 552 IPR012334 -
Vivi4g02743 601 Pfam Pectinesterase 237 529 IPR000070 GO:0030599|GO:0042545
Vivi4g02743 601 SUPERFAMILY Pectin lyase-like 234 549 IPR011050 -
Vivi4g02743 601 PANTHER PECTINESTERASE 19 541 - -
Vivi4g02743 601 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 34 187 IPR035513 -
Vivi4g02743 601 ProSitePatterns Pectinesterase signature 1. 262 281 IPR018040 -
Vivi4g02743 601 FunFam Pectinesterase 32 188 - -
Vivi4g02743 601 Pfam Plant invertase/pectin methylesterase inhibitor 36 183 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02743 Vivi-Chr4 130436156 130438362 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02743 36 548 Carbohydrate Esterase AT5G49180 45.681 7.18e-162 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02743 K01051 - gmx:100784682 744.962