Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02742 ATGGAAGGAAGGCGTGATAATATCAACCTTGGTGGTAACCAGAAGAAAAGGGTTGCACTTTTTGGTGTCTTTTACATTGTTCTTGTTGCTGTGGTCGGAACCGTTGCTGCGGTAGGTTTAACGCGCGGAGGCCTTGGAGGACAGGGAGAAGAAAATGTAAAAATCTCTACCACACAAAGGCACGCTGAAATGACTTGTCTATCAGACCCAAGTAAATGTGACACGAAACTCGGAAGAGTGTTTAGCAAAACAAGAAACATAAAAGATCGTATGAAGGACGCCTTCATTGAAGCAGCCGGGGAGTTATCGAAACACATAAAAGATCCAGCTCTTGCTAATGAGTTGGTAAAAGACAACATGACGGGACAAGCTATGCGAATTTGTAATGAGGTAATGGATCATGCTGTTGACGGAGTTAATAAATCTGTTGGTGAATTAGACAGATCTGATTTCAATAGGTTGAGTGATTTTCATTTCGATCTTCAAGTTTGGATGACTTCTACGCTTTCGGATCAACAAACGTGTTTGGATAGTTTCGAGAAAGTAGACTCAAAAGCTAGTCAGAGAATGGCTCAGGTTTTGAGCAATTCTATGAAACTAACTAACATTGCTATTGACATGCTTAATTCAGTTCCTGGATTGCATAAGGATTTTGGCAATATGCCACAAGGTTTTAATAGGAGGACTTTATCTGATGAATCAACAACGCGTGTTGATGGTTTTCCAACATGGGTTGGCGAAGGACAACGACGTCTTCTTGGGGCTTCGAGTGTTAAGGCAGATGCTGTTGTAGCGCAAGACGGTAGCGGAAAGTTTAAAACTGTTACCGAAGCTCTTAAGACTGTTCCGGCAAATAATGCAAAACCTTTTGTTATTTATGTCAAGGCTGGTGTTTATAAAGAGCATGTTATTATTCCTCTGAAGATGAATTATGTTACCATCATTGGTGATGGTCCTACAAAAACCAAAATCACAGGTGGCCTCAACTTCGTTGATGGCGTCCTAACTTACGACAGTGCAACCGTCGGTGTGAGTGGTGACAACTTCGTGGCGAAGGACATAGGCATCGAAAACACAGCAGGACCGAGTAAACAGCAAGCAGTAGCACTTAGAGTTTCAGGAGATATGGCAGTTATCCACAACTGTCAAATAGATGGTTACCAAGACACACTCTTCGCCCAATCCCTACGACAATTCTATCGCGATTGTAGCATCTCTGGTACAATCGACTTCATATTCGGCGACCCCTTTGGAGTTTTCCAAAACTGCAAAATCATAGCTAGAAAACCAGCAACAGGCCAAGCAAATTTAGTAACAGCTGGTGGAAAACTCACGGCGAGCACCCAAACTGCAATTGTTTTCCAAAGTTGTCACTTCTCTGGTGAACCAGCATTAGCATCGATGTCACCCAAAATAACTTTCTTAGGAAGACCATGGAAAGCATACTCCAGAGTTGTGATAATGGATTCAGTCATAGATGACATCTTTCTCCCTGAAGGTTACCAAGCATGGGTGGGAAATGCATTTACTGATACATGTACTTTTTTCGAGTATAACAACAAAGGTCCTGGTGCTGACACGAAAGCAAGAGTTAAATGGCCTCATGTTAAAACTATAACTGCTAATGAAGCTGCTGCTTTTTATCCTGGTAAATTCCTTCAGGTTTCTGGTTCACCTTGGATGACGAGTTCTGGAGTACCTTGTTCCCTTGGTCCTATGAGCGGTGGTTCTGCTGGAGCCTCGGCTTCTGCTTCTCCGGTTACAGCTTCTGGACCTTCTTCGTCTTCTTCAGCTTCTGGACCTTCTTCGTCTGCTTCTTCTTCTTCAGCTTCCGGACCTTCTTCGTCTTCATCATCTTCTTCCTCTTCTAAGGCTTCACCTTCTAAGGGGTCTTCTTCATCTTCTAAGTCTTCTAAGGAGTCTGAGAAGTCTTCTTCATCTTCTAAGTCTTCTAAGTCTTCTGAGGAGTCTGAGGAGTCTGATGATTGA 1989 0.4294 MEGRRDNINLGGNQKKRVALFGVFYIVLVAVVGTVAAVGLTRGGLGGQGEENVKISTTQRHAEMTCLSDPSKCDTKLGRVFSKTRNIKDRMKDAFIEAAGELSKHIKDPALANELVKDNMTGQAMRICNEVMDHAVDGVNKSVGELDRSDFNRLSDFHFDLQVWMTSTLSDQQTCLDSFEKVDSKASQRMAQVLSNSMKLTNIAIDMLNSVPGLHKDFGNMPQGFNRRTLSDESTTRVDGFPTWVGEGQRRLLGASSVKADAVVAQDGSGKFKTVTEALKTVPANNAKPFVIYVKAGVYKEHVIIPLKMNYVTIIGDGPTKTKITGGLNFVDGVLTYDSATVGVSGDNFVAKDIGIENTAGPSKQQAVALRVSGDMAVIHNCQIDGYQDTLFAQSLRQFYRDCSISGTIDFIFGDPFGVFQNCKIIARKPATGQANLVTAGGKLTASTQTAIVFQSCHFSGEPALASMSPKITFLGRPWKAYSRVVIMDSVIDDIFLPEGYQAWVGNAFTDTCTFFEYNNKGPGADTKARVKWPHVKTITANEAAAFYPGKFLQVSGSPWMTSSGVPCSLGPMSGGSAGASASASPVTASGPSSSSSASGPSSSASSSSASGPSSSSSSSSSSKASPSKGSSSSSKSSKESEKSSSSSKSSKSSEESEESDD 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02742 662 Gene3D Invertase/pectin methylesterase inhibitor family protein 65 212 IPR035513 -
Vivi4g02742 662 MobiDBLite consensus disorder prediction 574 641 - -
Vivi4g02742 662 ProSitePatterns Pectinesterase signature 2. 405 414 IPR033131 -
Vivi4g02742 662 FunFam Pectinesterase 4 258 572 - -
Vivi4g02742 662 CDD PMEI-like_3 69 213 - -
Vivi4g02742 662 Pfam Pectinesterase 261 554 IPR000070 GO:0030599|GO:0042545
Vivi4g02742 662 ProSitePatterns Pectinesterase signature 1. 286 305 IPR018040 -
Vivi4g02742 662 Gene3D - 258 573 IPR012334 -
Vivi4g02742 662 SMART PMEI_2 57 207 IPR006501 GO:0004857
Vivi4g02742 662 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 69 210 IPR035513 -
Vivi4g02742 662 PANTHER PECTINESTERASE 27 562 - -
Vivi4g02742 662 MobiDBLite consensus disorder prediction 574 662 - -
Vivi4g02742 662 SUPERFAMILY Pectin lyase-like 258 569 IPR011050 -
Vivi4g02742 662 Pfam Plant invertase/pectin methylesterase inhibitor 93 206 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02742 Vivi-Chr4 130427923 130430471 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02742 11 567 Carbohydrate Esterase AT5G49180 42.308 1.45e-150 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02742 K01051 - gmx:100784682 607.446