Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02740 ATGGAGGGAACAACGCGTGAGAATATCAACCGTGGTCGTAACCAGAAGAAAAGGATTGCAGTTGTTGGTTTCTCTTCCATTCTCCTTATCGCCGTGATTGGAACTGTCGCGGTCGGTTTAACGCGCAGCAGCTTAGAAGTACCGGGAGAACATAATGTAAAGATCTCTACCACACAAAGGGACGTTGAAATGCTTTGTCTATCAAACCCGGATAAATGTCAGACGAAAATCGGAAGATTTTTTAGCGGAGCAAGAAACAAAACAAGAAACATAAAAGAACGTATAAAAGACGCATTCATTGAAGAAGCTCGGGAGTTAATGAAACACATAAACAATCAAACTCTTGCTAGTGAATTTGTAAAAGACAACATGACGAGACAAGCGATGCGAATTTGCAACGAAGTAATGGATAGTGCTGTTGGTGGAGTTAATAAATCTGTTGGAGAATTAGACAGATTTGATTTCAATAGGTTGAGTGACTTTGTTTTTGATCTTCATGTTTGGATCACTGGGACGCTTTCGGATCAACAAACATGTTTGGATAGTTTTGAGAAAGCAGACTCAAAAGCTAGTCAGAGAATGGCTCAGGTTTTGAGCGCTTCTATGAGATTCAGCCAAGTTGCTCTTGACATGATTAATTCTGTTTCTGGATTACTTAAGGATTTTGGTCAAAATCCAAGAAGTCTTAACCGGAGGCTTTTATCCGATGAATCGGAAAAACTTGTTGATAGTTATCCGTCATGGGTTAGTGAAGGACAAAGACGGCTTCTTGCTGATCCGAGCGTTAAGCCAGATGCTGTTGTGTCGCAAGACGGTAGCGGAAAGTTTAAAACTGTTACCGAAGCTCTTAAGACTGTTCCGTCAAATAATGCGAAACCTTTTGTCATTTATGTTAAGGCTGGTGTTTATAAAGAGCAAGTTCTTATTCCTCTGAAGATGAATTATGTTACAATCATTGGTGATGGTCCTACAAAAACCAAGTTCACAGGTGGCCTCAACTTCGCTGATGGCGTCCTAACTTATGATAGTGCAACCATCGGTGTGAATGGTGACAACTTCGTGGCGAAGGATATAGGCATTGAAAACACAGCAGGACCGAATAAAAAGCAAGCAGTAGCACTAAGAGTTTCAGGAGACATGGCAGTATTGTACAACTGTCAAATAGATGGTTACCAAGACACACTCTTCGCCCAATCCCTACGCCAATACTATCGCGATTGTAGCATCTCTGGTACAATCGACTTTATATTCGGCGACCCCTTTGGAGTTTTCCAAAACTGCAAAATTATAGTTAGAAAACCAGCAACAGGCCAAGCCAATTTAGTAACAGCTGGTGGAAGACTCACATCGAGCAGCGCAGGTGCACTTGTTTTCCAAAGTTGCCACTTCTCAGGTGAACCAGCATTAGTGTCAATGTCACCCAAAATATCTTTCCTAGGAAGACCATGGAAAGCATACTCCAGAGTTGTGATAATGGATTCAGTCATAGATGACATCTTTCTCCCCGAAGGTTACCAAGCATGGATGGGAAATGATTTTACCGACACATGTACTTTTTATGAGTATAACAATAAAGGTCCTGGTGCTGACACGAAAGGAAGAGTCAAATGGCCTAATGTTAAAACTATAACTTCTAATGAGGCTGCTTCTTTTTACCCTGGTAAATTTCTTAAGGTTTCTGGTTCACCTTGGATGACGAGTCATGGGGTACCATGTTCCCTTGGTCCTATGAGTGGTGGTTCTGCGGCTTCGTCTTCTCCAGCTACTGCGTCTGCACCTTCTCAGTCTACTTCACCTTCTTCGTCTTCTCCAGCTACCGCGTCTGGGCCTTCTCAGTCTTCCTCGTCTTCTTCACCTTCTAAGTCTTCTCCGCCTTCTGAGGAGTCTGGGTCTTCTTCGTCTTCCGACAACTCTAAGTCTTCTTCGCCTTCTAAGTCTTCTCCGCCTTCTGAGGAGTCTGGGTCTTCTTCGTCTTCCGACAACTCTAAGTCTTCTTCACCTTCTAAGTCTTCTCCGCCTTCTGAGGAGTCTGGGTCTTCTTCGTCTTCTGACAACTCTAAGTCTTCTGACAACTCTAAGTCTTCTTCGCCTTCTAAGTCTTCTGATGAGTCTGGATCTTCTTCGTCTTCTGACAAATCTAAGTCTTCTTCGCCTTCTAAGGAGTCCGAGGAGTCTAAGTCTTCTTCGTCTTCTGAGAAGTCTAAGTCTTCTTCCTCAGAAGAGGAGTCTAAGTCTTCTTCCTCAGAAGAGGAGTCTTGA 2259 0.4307 MEGTTRENINRGRNQKKRIAVVGFSSILLIAVIGTVAVGLTRSSLEVPGEHNVKISTTQRDVEMLCLSNPDKCQTKIGRFFSGARNKTRNIKERIKDAFIEEARELMKHINNQTLASEFVKDNMTRQAMRICNEVMDSAVGGVNKSVGELDRFDFNRLSDFVFDLHVWITGTLSDQQTCLDSFEKADSKASQRMAQVLSASMRFSQVALDMINSVSGLLKDFGQNPRSLNRRLLSDESEKLVDSYPSWVSEGQRRLLADPSVKPDAVVSQDGSGKFKTVTEALKTVPSNNAKPFVIYVKAGVYKEQVLIPLKMNYVTIIGDGPTKTKFTGGLNFADGVLTYDSATIGVNGDNFVAKDIGIENTAGPNKKQAVALRVSGDMAVLYNCQIDGYQDTLFAQSLRQYYRDCSISGTIDFIFGDPFGVFQNCKIIVRKPATGQANLVTAGGRLTSSSAGALVFQSCHFSGEPALVSMSPKISFLGRPWKAYSRVVIMDSVIDDIFLPEGYQAWMGNDFTDTCTFYEYNNKGPGADTKGRVKWPNVKTITSNEAASFYPGKFLKVSGSPWMTSHGVPCSLGPMSGGSAASSSPATASAPSQSTSPSSSSPATASGPSQSSSSSSPSKSSPPSEESGSSSSSDNSKSSSPSKSSPPSEESGSSSSSDNSKSSSPSKSSPPSEESGSSSSSDNSKSSDNSKSSSPSKSSDESGSSSSSDKSKSSSPSKESEESKSSSSSEKSKSSSSEEESKSSSSEEES 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02740 752 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 69 215 IPR035513 -
Vivi4g02740 752 Gene3D - 262 577 IPR012334 -
Vivi4g02740 752 SUPERFAMILY Pectin lyase-like 262 573 IPR011050 -
Vivi4g02740 752 Pfam Plant invertase/pectin methylesterase inhibitor 69 209 IPR006501 GO:0004857
Vivi4g02740 752 CDD PMEI-like_3 70 217 - -
Vivi4g02740 752 PANTHER PECTINESTERASE 29 565 - -
Vivi4g02740 752 FunFam Pectinesterase 4 262 576 - -
Vivi4g02740 752 Gene3D Invertase/pectin methylesterase inhibitor family protein 62 217 IPR035513 -
Vivi4g02740 752 ProSitePatterns Pectinesterase signature 1. 290 309 IPR018040 -
Vivi4g02740 752 Pfam Pectinesterase 265 558 IPR000070 GO:0030599|GO:0042545
Vivi4g02740 752 MobiDBLite consensus disorder prediction 578 752 - -
Vivi4g02740 752 MobiDBLite consensus disorder prediction 578 715 - -
Vivi4g02740 752 SMART PMEI_2 57 211 IPR006501 GO:0004857
Vivi4g02740 752 MobiDBLite consensus disorder prediction 716 752 - -
Vivi4g02740 752 ProSitePatterns Pectinesterase signature 2. 409 418 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02740 Vivi-Chr4 130416219 130419087 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02740 12 571 Carbohydrate Esterase AT5G49180 43.007 1.96e-155 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02740 K01051 - gmx:100784682 658.292