Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi4g02738 | ATGTACAATTGGGAATATAGAGAAATGGGAGATGTGCTTCCTCTTTCGCAAGTGCCTAATGATGTAGCAATGGCTTTCAAAAGGGAAATCGAGTGGCAAACAAATCACATGCTTTTACCTTTTAAGAGCTTGTGCGAGCAAAGAAAGGTGCATGTAGATGTTGTAGTGATTGAATCAGATGATGTAGTAACTGCGGTAGCGGAGGAAGTAACTAAGGACGCTTTAACCAAACTTGTCGTTGGAGCTTTGTCTTCTGGTATTTTCAGAAGTAAACATAAGGGTATGCACTCCAACATTTTGTACGGTTTACGCTGTTTCAAAGGGAAAATTGTCCATACGGCAATCAGACACACAAGTTGA | 360 | 0.4056 | MYNWEYREMGDVLPLSQVPNDVAMAFKREIEWQTNHMLLPFKSLCEQRKVHVDVVVIESDDVVTAVAEEVTKDALTKLVVGALSSGIFRSKHKGMHSNILYGLRCFKGKIVHTAIRHTS | 119 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi4g02738 | 119 | PANTHER | U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE | 12 | 92 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vivi4g02738 | Vivi-Chr4 | 130389719 | 130391453 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Vivi4g02738 | 9 | 91 | U-box Gene Family | AT4G25160 | 46.988 | 9.04e-22 | 87.4 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi4g02738 | - | - | vvo:131595220 | 229.18 |