Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02737 ATGGAAGGAACCCCTGATAACGTTAACCGTGGCCGGAACCAAAAGAAAAGATTTGCAATTCTTGGTATCTCTTCCATTCTTCTTGTTGCAATGATTGGCACGGTCGGGGTAAGTTTAACGCGCAGCGGCTCTGCAGAAGAGAATGGAAAAATCTTTACCACACAAAGAGACATTGATATGCTTTGCATGTCAAATCCAGATAAATGCAACACGAAACTCGGACGAGCATTTGGCAAAGCAAGAAGCATAAAAGATCGGATGAAAGGTACGTTCGTTGAAGCGAGGGGAGAGTTGATGAAAAACATAAACAATTCAGCTCTTTCTAAAGAATTGGTAAAAGACGACTTGACGAGACAAGCGATGCAAATTTGCAATGAAGTGTTGGGCAAGGCTGTTGATAGGTTTAACAAATCTGATGGTATATTAGACAAATGTGATTTCAATAAGTTGGGTGACTTTATTTTCGATCTTCAAGTTTGGACAAGTGCTACGCTTTCGGATCAGCAAACATGTTTGGATAGTTTTGAGAAAGCAGACTCAAAAGCTGGTCAGAGAATGGCTCAGGTTTTGAGCAATTCTATTAGACTAAGTGATAAATCTATTGACATGATGAATTCTGTTTCTGAATTACTTAAGGATTTCGGACATGGACAGAATAATGATAATAATGTTAATAATGCTAATAGGAGGCTTTTATCCGATGAATCGGAAAAACTAGTCGATCGTTTTCCAACATGGGTTAGCGAGGGACAGAGACGTCTTCTTGCTGGTCCTCCAAGTGTCAAGCCAGATGCTGTTGTGGCGCAAGATGGTAGCGGACAGTTTAAAACCGTCGCCGAAGCTATTAAGACTGTTCCGGCGAATAATGCAAAACCTTTTGTTATTTATGTTAAGGCCGGTGTTTATAAAGAGGTTGTTAATATTCCTGAGAAGGTGGATTATGTTACCATCATGGGTGATGGTCCTACAAAGACTAAATTCACAGGTAGCCTCAACTTTGTCGATGGCGTCCTAACTTACGACAGTGCAACCTTCGCTGTGAATGGTGCAAACTTCGTGGCGAAGGATATAGGCATCGAAAACACAGCCGGACCGAGTAAACAACAAGCAGTAGCACTCAGAGTTTCAGGAGACATGGCAGTATTCCATAACTGTCAAATAGATGGTAACCAAGACACTCTCTTCTGCACAAACCTGCGTCAGTTCTTCCGCGATTGTAGCATCTCCGGTACAATCGACTTCATCTTCGGCGACCCCTTTGCCGTTTTCCAAAACTGCAAAATTTTAGTTCGAAAACCAGCACCAGGCCAAGCCAATTTAGTAACAGCTGGTGGAAGACTCACTGAGTCCAGCAAAAGTGCTATAGTTTTCCAAAGTTGTCATTTCTCAGGTGAACCTGCATTAGCAACAGTTTCACCCAGAGTATCTTTCCTAGGAAGGCCATGGAAACCATTCTCCAGAGTTGTGATATTGGATTCAATCATAGATGACGTCTTTCTCCCGGAAGGCTACGAAGCATGGGTGGGAAATAAATTTACCGACACATGTACTTATTTTGAGTATAATAACAAAGGTCCTTGCGCTGACACGAAAGCGAGAGTTAAATGGCCTCATGTTAAAAGTATAACTGCTGCTGAGGCTGCTGCTTTTTACCCTGGTAAATTCTTTGCGGCTGCTGGTTCAGGTAATACTTGGATGACAAATTCAGGTACACCTTGTTCACTTGGACCTATGAGCGGCGGTTCCGCTGCTGAAGCCACACCTTCTGCAGCTTCTGCGCCTTCCGAGTCTTCTACCGGAGCTTCTGCGCCTTCTACGTCTTCCACTCCTTCTGCAGCTTCTGCGCCTTCTGAGTCTTCTACCGGAGCTTCTGCGCCTTCTAAGTCTTCCAAACCTTCTGCAGCTTCTGCGCCTTCTAAGTCTTCTACCGGAGCTTCTGCTCCTAAGTGA 1950 0.4374 MEGTPDNVNRGRNQKKRFAILGISSILLVAMIGTVGVSLTRSGSAEENGKIFTTQRDIDMLCMSNPDKCNTKLGRAFGKARSIKDRMKGTFVEARGELMKNINNSALSKELVKDDLTRQAMQICNEVLGKAVDRFNKSDGILDKCDFNKLGDFIFDLQVWTSATLSDQQTCLDSFEKADSKAGQRMAQVLSNSIRLSDKSIDMMNSVSELLKDFGHGQNNDNNVNNANRRLLSDESEKLVDRFPTWVSEGQRRLLAGPPSVKPDAVVAQDGSGQFKTVAEAIKTVPANNAKPFVIYVKAGVYKEVVNIPEKVDYVTIMGDGPTKTKFTGSLNFVDGVLTYDSATFAVNGANFVAKDIGIENTAGPSKQQAVALRVSGDMAVFHNCQIDGNQDTLFCTNLRQFFRDCSISGTIDFIFGDPFAVFQNCKILVRKPAPGQANLVTAGGRLTESSKSAIVFQSCHFSGEPALATVSPRVSFLGRPWKPFSRVVILDSIIDDVFLPEGYEAWVGNKFTDTCTYFEYNNKGPCADTKARVKWPHVKSITAAEAAAFYPGKFFAAAGSGNTWMTNSGTPCSLGPMSGGSAAEATPSAASAPSESSTGASAPSTSSTPSAASAPSESSTGASAPSKSSKPSAASAPSKSSTGASAPK 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02737 649 Gene3D Invertase/pectin methylesterase inhibitor family protein 62 208 IPR035513 -
Vivi4g02737 649 ProSitePatterns Pectinesterase signature 2. 408 417 IPR033131 -
Vivi4g02737 649 FunFam Pectinesterase 4 261 577 - -
Vivi4g02737 649 CDD PMEI-like_3 66 208 - -
Vivi4g02737 649 MobiDBLite consensus disorder prediction 576 649 - -
Vivi4g02737 649 SMART PMEI_2 53 203 IPR006501 GO:0004857
Vivi4g02737 649 ProSitePatterns Pectinesterase signature 1. 289 308 IPR018040 -
Vivi4g02737 649 MobiDBLite consensus disorder prediction 585 649 - -
Vivi4g02737 649 Pfam Pectinesterase 264 556 IPR000070 GO:0030599|GO:0042545
Vivi4g02737 649 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 64 206 IPR035513 -
Vivi4g02737 649 PANTHER PECTINESTERASE 25 567 - -
Vivi4g02737 649 SUPERFAMILY Pectin lyase-like 261 575 IPR011050 -
Vivi4g02737 649 Gene3D - 261 578 IPR012334 -
Vivi4g02737 649 Pfam Plant invertase/pectin methylesterase inhibitor 102 194 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02737 Vivi-Chr4 130375239 130377643 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02737 11 572 Carbohydrate Esterase AT5G49180 42.133 4.34e-150 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02737 K01051 - gmx:100784682 628.632