Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02732 ATGGAAGGAACCTGTGATAACGTTAACCGTGGCCAGAACCAAAAGAAAAGATTTGCAATTCTTGGTATATCTTCCATTCTTCTTGTTGCAGTGATTGGCACGGTCGGGGTCAGTTTAAAGCGCAGCGGCTCTGCAGAAGAGAATGGAAAAATCTTTACCACACAAAGAGACATTAATATGCTTTGCATTTCAGATCCAGATAAATGCAACACGAATCTCGGACGAGCATTTGGCAAAGTAATAAACATGAAAGATCGGATGAAAGGTATGTTCGATGAAGAGAGAGGAGAGTTAATGAAAAACATAAACAATTCAGCTCTTTTTAATGAGTTGGTAAAAGACAACTTGACGAGACAAGCTATGCGAATTTGCAATGAAGTGTTGGGCAAGGCTGCTGATAGGCTTACCAAATCTGATGGTATATTGGACAGATTTGATTTCAATAGGTTAGGTGAATTTGTTTTCGATCTGCAAGTTTGGATAACTGCGACGCTTTCGGATCAACAAACATGTTTGGATAGTTTTGAGAAAGCAGACACAAAAGCTAGTCAGAGAATGGCTCAGGTTTTGAGCACTTCTATAAGTCTAACTAATAAGGCTATTGACATGATGAATTCTGTTTCTGGAATACTTAAGGATTTCGGACAAGGTCCGAATAATGCTAATAGGAGGCTTTTATCTGATGAATCGGAAAAACTTGTCGATGGTTTTCCAACTTGGGTTAGCGAGGGACAGAGACGTCTGCTCGCTGGTCCAAGTGTTAAGCCAGATGCTGTTGTGGCGCAAGATGGTAGTGGACAGTTTAAAACCGTCGCCGAAGCTATTAAGACGGTTCCGGCGAATAATGCAAAACCTTTTGTAATTTATGTTAAGGCTGGTGTTTATAAAGAGGTTGTTAATATTCCTCCGAAGATGGATTATGTTACCATCATGGGTGATGGTCCTACAAAGACGAAATTCACAGGTAGCCTCAACTTTGTCGATGGCGTCCTAACTTACGACAGCGCAACCGTCGCTGTAAATGGCGCAAACTTCGTGGGGAAGGATATAGGCATTGAAAATACAGCAGGACCAGAGAAACACCAAGCAGTAGCACTCAGAGTTTCAGGAGACATGGCAGTATTCCACAACTGTCAAATAGATGGTAACCAAGACACTCTCTTCTGCACAAACTTGCGCCAGTTCTTCCGCGATTGTAGCATCTCTGGTACAATCGACTTCATCTTCGGCGACCCTTTTGCAGTTTTCCAAAACTGCAAAATTATAGTTAGAAAACCATTAAAAGGCCAAGTCAATTTAGCAACAGCTGGTGGAAGACTCACCGAGTCCAGCAAAACTGCGCTTGTTTTCCAAAGTTGTCACTTCTCAGGCGAACCTGGATTAGCATCGATTTCACCCAAAGTATCTTTCCTAGGAAGGCCATGGAAACCATTCTCCAGAGTTGTGATCTTGGATTCAATCATAGATGACATCTTTCTCCCTGAAGGCTACCAACCATGGGAGGGAGACGCATTTACCGACACATGTACTTATTTTGAGTATAATAACAAAGGTCCTGGTGCTGACACGAAAGCGAGAGTTAAATGGCCTAATGTTAAGACTATTACTGCTGCTGAGGCTGCTGCTTTTTACCCTGGTAAATTCTTTGAGGCTGCTGGTTCAGGTAATACTTGGATGACAAATTCTGGGACACCTTGTTCACTTGGACCTATGAACGGCGGTCCCGCTGCTGAAGCCACGCCTTCTCCAGCTTCTGCAGCTTCTGCGCCTTCTACGTCTGCCACGCCTTCTGCAGCTCCTGCGCCTTCCGAGTCTTCTACCAAAGCTTCTGCGCCTTCTACGTCTGCCACGCCTTCTGCAGCTCCTGCGCCTTCCGAGTCTTCTACCAAAGCTTCTGTGCCTTCTACGTCTGCCACGCCTTCTGTAGCTCCTGCGCCTTCCGAGTCTTCTACCAAAGCTTCTGCGCCTTCTAAGTCTTCCAAGCCTTCTGCAGCTCCTGCGCCTTCTACGTCTTCCACGCCTGCTGCAGATTCTGCGCCTTCTGAATCTTCCACGCCTGCTGCAGATTCTGCGCCTTCTGAATCTTCTACCGGAGCTTCTGCTCCTGAGTGA 2112 0.4527 MEGTCDNVNRGQNQKKRFAILGISSILLVAVIGTVGVSLKRSGSAEENGKIFTTQRDINMLCISDPDKCNTNLGRAFGKVINMKDRMKGMFDEERGELMKNINNSALFNELVKDNLTRQAMRICNEVLGKAADRLTKSDGILDRFDFNRLGEFVFDLQVWITATLSDQQTCLDSFEKADTKASQRMAQVLSTSISLTNKAIDMMNSVSGILKDFGQGPNNANRRLLSDESEKLVDGFPTWVSEGQRRLLAGPSVKPDAVVAQDGSGQFKTVAEAIKTVPANNAKPFVIYVKAGVYKEVVNIPPKMDYVTIMGDGPTKTKFTGSLNFVDGVLTYDSATVAVNGANFVGKDIGIENTAGPEKHQAVALRVSGDMAVFHNCQIDGNQDTLFCTNLRQFFRDCSISGTIDFIFGDPFAVFQNCKIIVRKPLKGQVNLATAGGRLTESSKTALVFQSCHFSGEPGLASISPKVSFLGRPWKPFSRVVILDSIIDDIFLPEGYQPWEGDAFTDTCTYFEYNNKGPGADTKARVKWPNVKTITAAEAAAFYPGKFFEAAGSGNTWMTNSGTPCSLGPMNGGPAAEATPSPASAASAPSTSATPSAAPAPSESSTKASAPSTSATPSAAPAPSESSTKASVPSTSATPSVAPAPSESSTKASAPSKSSKPSAAPAPSTSSTPAADSAPSESSTPAADSAPSESSTGASAPE 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02732 703 ProSitePatterns Pectinesterase signature 1. 282 301 IPR018040 -
Vivi4g02732 703 ProSitePatterns Pectinesterase signature 2. 401 410 IPR033131 -
Vivi4g02732 703 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 65 207 IPR035513 -
Vivi4g02732 703 PANTHER PECTINESTERASE 25 560 - -
Vivi4g02732 703 Pfam Plant invertase/pectin methylesterase inhibitor 106 192 IPR006501 GO:0004857
Vivi4g02732 703 SMART PMEI_2 53 203 IPR006501 GO:0004857
Vivi4g02732 703 MobiDBLite consensus disorder prediction 566 703 - -
Vivi4g02732 703 Gene3D - 254 571 IPR012334 -
Vivi4g02732 703 FunFam Pectinesterase 4 254 570 - -
Vivi4g02732 703 Pfam Pectinesterase 257 550 IPR000070 GO:0030599|GO:0042545
Vivi4g02732 703 SUPERFAMILY Pectin lyase-like 253 568 IPR011050 -
Vivi4g02732 703 Gene3D Invertase/pectin methylesterase inhibitor family protein 63 207 IPR035513 -
Vivi4g02732 703 CDD PMEI-like_3 113 209 - -
Vivi4g02732 703 MobiDBLite consensus disorder prediction 584 703 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02732 Vivi-Chr4 130311070 130313685 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02732 11 559 Carbohydrate Esterase AT5G49180 43.440 1.48e-156 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02732 K01051 - gmx:100784682 644.81