Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02713 ATGGAAGGTAACAAAGACGAAGCATTGCGATGCATCAAAATCGCCGAAGAAGCGATTGCTTCAGGTAACAAAGATCGCGCTCTCAAATTCATGAAAATCGCCAAACGTCTAAACCGTGATTTATCGCTTGATTCCTTGTTCACGAAGTGCGAACGACTGGATTCTCAGTCCGCCGCCTCTTCCTCCGGCGTTGGCACCTCGGATAAACCGGGAAGAGCCAGAGATGGTGGTGGTGGTGGTTTGAATGTTGAGAGGACTTACACGGAGGAGAATGTTAAGTTGATTAGGGAAATTAAAGGAAAAAGTGATTACTATTCGATTTTAGGTTTGGAGAAAAGTTCTTCTGTTGAAGAGATTAGGAAGGCTTATAGGAAACTGTCTTTGAAGGTTCATCCTGATAAGAATAAAGCGCCGGGTTCGGAAGACGCGTTTAAGAAAGTTTCGAAGGCGTTTAAGTGTTTGAGTGACGGTGATTCTAGACGTGAGTATGATCAAGGAGGGTTAGTTGATGAGTTTGATTCGAATTATAATCAGGGGAACAATTTTAGGCGGAGGAGGAGAAGGAATACTACGAGTCATGATGTTTTCGAAGAGGAGTTTGATCCTAATGAGATATTTAGAGCTTTCTTTGGACAACCTGATGTGTTTGGGAGGAGAAATCATGTTTATACGACTCGAGGTGGCGGTGGGATGGGTAACCAACATCAGAGGCGTGAGGTTCAGGGTGGAGGAGGACATTATCTTATGCTGATGATTCAGCTTCTGCCGTTGTTGATTATTTTGTTGCTGGCTTACATGCCCTTTTCGGATCCTGAATATTCCTTGCACAGGAATCAGTCCTACCAGATTCCGAAGGTTACTGAGGATTATGGGGTTCAGTTTTTCGTGAAATCTCAGGCATTTGATTCTAATTATCCGATTGGTAGTTCGGCTCGCGAGACCATTGAGGATAATATTATAAAGGATTATAAGAGTATGCTTCGTCGGTATTGTCAAGTGGAGATTCAGAGGCGTACTTGGAATAGGAATCTGGCTGTTCCTCACTGTGAAAAGCTTCAAAATTTTGGGGTTGTAGCTTGA 1080 0.4333 MEGNKDEALRCIKIAEEAIASGNKDRALKFMKIAKRLNRDLSLDSLFTKCERLDSQSAASSSGVGTSDKPGRARDGGGGGLNVERTYTEENVKLIREIKGKSDYYSILGLEKSSSVEEIRKAYRKLSLKVHPDKNKAPGSEDAFKKVSKAFKCLSDGDSRREYDQGGLVDEFDSNYNQGNNFRRRRRRNTTSHDVFEEEFDPNEIFRAFFGQPDVFGRRNHVYTTRGGGGMGNQHQRREVQGGGGHYLMLMIQLLPLLIILLLAYMPFSDPEYSLHRNQSYQIPKVTEDYGVQFFVKSQAFDSNYPIGSSARETIEDNIIKDYKSMLRRYCQVEIQRRTWNRNLAVPHCEKLQNFGVVA 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02713 359 CDD DnaJ 103 156 IPR001623 -
Vivi4g02713 359 Gene3D DnaJ domain 100 221 IPR036869 -
Vivi4g02713 359 PRINTS DnaJ domain signature 105 123 IPR001623 -
Vivi4g02713 359 PRINTS DnaJ domain signature 123 138 IPR001623 -
Vivi4g02713 359 PRINTS DnaJ domain signature 139 159 IPR001623 -
Vivi4g02713 359 ProSiteProfiles dnaJ domain profile. 103 167 IPR001623 -
Vivi4g02713 359 Pfam Domain of unknown function (DUF1977) 268 339 IPR015399 -
Vivi4g02713 359 Pfam DnaJ domain 103 164 IPR001623 -
Vivi4g02713 359 PANTHER AT29763P-RELATED 1 354 - -
Vivi4g02713 359 SMART dnaj_3 102 159 IPR001623 -
Vivi4g02713 359 SUPERFAMILY Chaperone J-domain 99 170 IPR036869 -
Vivi4g02713 359 MobiDBLite consensus disorder prediction 58 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02713 Vivi-Chr4 129210503 129213152 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02713 98 164 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 36.620 3.66e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02713 K09518 - gmx:100820432 471.085