Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02706 ATGTCTTCTTCTTATTCATGGCTAACTTCTCCTTCATGCACCCTTTGGCCTATAGATTCATCTTCCTCTACACCAAACCTCATACTTCAATGGTTAACCTTTCTTTTTCTATCTCCATGTCCTCAAAGACTTCTTCTTTCTGCTCTTGATTTCTTGTTTTTGCTCTTTCTCTTAGCTTTTGCAGCTCACAAATTCTACTCAAGGTTCAACTCAGCTTCCAACTCTACCTCCTCAATCACAAAACCACTTCTGCAGGAGAAAGATTCTGACTATAGAATCACATTTTTGTTCAAACTACCTTTGTTGGTAACTATCCTTTTGGCTATAACTTACACTGTTCTAGGAGTTTTGGCTTTTACTCAAACCAATAACTTTGCTTCATGGAAACAAATAGAAGCGCTTTTTCGGTTGTTTCAAGCAGTAGTCAACATAGTGATAGTGGTTCTAATGATACATGAGAAAAAGTTCAAATCTTTCAAACACCCTTTATCACTAAGAATCTATTGGGTAGCAAACTTTGTGATTGCTGCTTTGTTTGCTGCTTCAGCTATTGTTCGGTTTGTAACTTTAGGTGAAGAAAAATTGGAACTTAGTTTGAGAATAGATGACATATTCTCACTGGTTAACCTTCCATTATCTGTGTTCTTTTTTGTGATATCCATAAAAGGGTCATCAGGGATTCAAGTGATAAGAATATCCGATGAAGTAGCGATATATCCATTGAATTCGAGGGATAGAACTTTGAGTCCTTATGCTAGTTCTTCAATTTTATCCAAATCAGTTTGGTTATGGATAAACCCTTTACTTAATAAAGGTTACAAAACACCCCTTAACCTAGAAGATGTTCCCTCACTTCCTCTTGAGTGTAGAGCAGAAAAAATGTCTGAACTTTTTCAAAACAATTGGCCAAAAGCAGATGAAAACAGTAAGCATCCTGTTGGACTAACCCTTGTCAGGTGTTTCTGGAAACACGTAGCTTTCACTGCTTTCCTTGCATTCATTAAGCTTTGTCTTATATATGTTGGTCCATTGTTGATTCAGAGTTTTATTGAGTTCACATCGAGGAAAGATAGCACTGCTGGTGAAGGTATTGTTTTGATATTGATCCTTTTTGTAGCAAAATCAGTTGAAGTACTTAGTGCCCATCAATACAACTTCCAATGTCAGAAACTCGGTATGCTTATTCGCTCAAGCATAATCACTTCGGTTTACAAAAAGGGTTTAAGATTGTCGAGTTCTTCAAGACAAACTCATGGAACAGGACAAATTGTGAATCATATGGCTGTTGATGCTCAACAACTCTCAGATATGATGATGCAGTTACATCCTATATGGTTGATGCCATTGCAAGTTACTGCTGCACTGGTTCTTATATATAGCTATATTGGTGTATCTGCTGTTGCAGCATTTCTTGGATCTGCGGTAGTTTTTTTCTTCACGACATATCGAACTAAGAGTAGTAATGGTTTCCAGTTTCAGATAATGACGAGCCGCGATTTGAGACTGAAGGCGACAAATGAATTGCTTAACAATATGCGTGTGATTAAGTTTCAAGCGTGGGAAGAGTATTTCGGTAACAAAATTCGAAAGTTTCGTGAAGCCGAGCATGGATGGATTGGGAAGTTCTTGTACAATTTTGCTGTTAACTATGGAGTATTGTCTGCTGCACCATTAGTTGTAACTGTTCTTACCTTTGGAACTGCAACTTTTATTGGAATTCCTTTGAATCCCGGCACTGTTTTCACAATAACTTCGATTATCCAGATACTTCAAGAGCCTTTGAGGAGTTTTCCTCAGGCTCTTATGATGGTTTCTCAAGCAATAATATCTTTAGCGAGGTTGGATGAGTTCATGATGAGCAGGGAAATGGATGAGAATGCAGTGCAAAAAGTGGAGAATTGTGATGGTGATATAGCTGTGGAGATAAAAGATGGGAAATTCTCGTGGGATGATAACGATGAGAATGATGCTTTAAGAGTTGAAGAGTTGGAAATTAAGAAAGGAAATCATGCTGCTGTTGTAGGAACTGTTGGTTCAGGCAAGTCTTCATTATTGGCTTCTTTGTTGGGAGAAATGTTCAAGATCTCAGGAAAGGTTAGAGTTTGTGGGACAACAGCGTATGTAGCACAAACATCGTGGATTCAGAACGCAACCATCAAAGAAAACATATTGTTTGGTTTACCAATGAACATGGACAAGTACAGGGAAACTTTAAGAGTGTGCTGCCTTGAGAAGGATCTTGAAATGATGGAAGATGGTGATGAGACCGAGATTGGAGAGCGCGGAATAAACCTTAGCGGCGGTCAGAAACAACGCATACAGCTTGCTAGAGCTGTATATCAGGACACTGACATCTATCTCCTTGATGATGTATTCAGTGCTGTTGATGCTCAAACAGGATCTTTTATTTTTAAGGAATGTATCATGGGAACTCTGAAAGATAAGACTGTTTTACTTGTAACCCATCAAGTTGATTTCTTGCATAATGTTGACTCTATAATGGTGATGCGTGATGGGAGAGTAGTGCAAAGTGGAAAGTATGATGATCTTCTCAAAGCAGGACTAGATTTTGGTGCACTTGTAGCAGCTCACGAATCCTCAATGGAAATAGCAGAAACGGGAGACAAAACTAGTGATGATTCAGCTGAATCTCCAAAACTTGCTCGCATTGCATCGAAAGAAAAAGAAAGCGGCGGTGAAAAGCAGTCTTCTCAAGATCAATCCAAGTCTGATAATAAAACTGCAGCAAAGCTCATTGAAGATGAGGGGAGAGAAACTGGACATGTTAGCCTTAAAGTATACAAACAATATTTCACAGAAGCATTTGGATGGTGGGGAATAGCACTTGTAGTAGCAATGTCAGCGGGGTGGGTGTTGTCATTTTTGGCTTGTGACTATTGGTTAGCAATTGCTACGTCAGATGGTTCTGGCATTTCTTCAGTTACTTTCATTTCCGTCTATGCTGCTATAGCTGTTGTTGCATGCATAGTTGTTATAGTAAGAGCTTTCTTGTATACGTATTTGGGTTTAAAGACATCTCAAAGCTTCTTCGTTGGAATGCTTCAAAGTATCCTTCATGCACCAATGTCATTCTTTGATACCACTCCTTCTGGCAGAATTTTGAGTCGTGTATCTACTGATATACTGTGGGTGGATATAACAATTCCAATGTTTGCAAACTTTGTAATGATAGCCTACTTAACATTACTTAGTATCCTCATTGTCACATGCCAGAATTCTTGGGAGACTGTCTTTCTCTTAATTCCACTGGTCTGGCTCTACAACTGGTATAGGAAATATTATCTTGCAACTTCTAGGGAACTGACTCGTCTTGATTCAATCACAAAAGCTCCAGTGATTCATCACTTTTCAGAGACCCTTTCTGGTGTTATGACAATACGTAGCTTAAGAAAACAGAATGCATTTTCTCAGGAAAATATTGACAGGGTGAATGCAAGTCTAAGAATGGATTTCCATAACAATGGTGCAAATGAATGGCTTGGGTTTCGCTTGGACTACATGGCAGTGGTTTTCCTTTGTATTGCCACCTTTTTTATGATCTTTTTGCCAAGTGCGATTGTTAAACCAGAATATGTTGGTATGTCTCTATCCTATGGCCTGGCTCTGAGTGGTCTTTTGTCATTTGCCATATATATGAGTTGCAATGTTGAGAACAAAATGGTTTCGGTTGAGAGGATAAAACAGTTTACCAACCTCCCATCAGAAGCTCCATGGAAAATAGCTGACAAGTCTGTTCCTCAGAATTGGCCTAGTCATGGAACTATAGAGTTAAATAATTTACAGGTTCGGTACAGGCCAAATACTCCTCTAGTTCTTAAGGGAGTCTCTCTAACCATTCAAGGTGGAGAAAAAGTTGGTGTTGTTGGCCGTACTGGAAGTGGAAAATCAACACTCATTCAAGTTTTATTTAGGATGATTGAGCCTTCCGCTGGGAATATAATCATCGATGGTATCAACATTTCGACTGTTGGCCTTCATGATTTGAGGTCGCGTTTTGGAATTATTCCGCAAGATCCTGTCCTCTTTCAAGGAACAGTTAGAACCAACATTGACCCTCTTGGATTGTATTCCGAAGATGAAATTTGGAAGAGTCTTGAGCGGTGCCAATTGAAAGATGTGGTAGCTGCAAAACCAGAGAAACTTGAGGCTTTAGTGGTTGATGGTGGAGACAACTGGAGTGTTGGACAAAGGCAACTTCTATGCTTGGGAAGGATCATGCTAAAACGCAGCAGAATACTATTCATGGATGAAGCGACAGCGTCGGTTGATTCACAAACGGATGCAGTAATACAAAAGATCATCAGAGAAGATTTTGCAGATCGTACAATAATTAGCATTGCTCACAGAATACCAACGGTTATGGATTGTGACAAGGTTTTGGTCATAGACGCAGGTTTTGCGAAGGAATATGAGAAACCATCGCGTTTGCTTGAAAGGGCTTCACTTTTTGCAGCATTGGTTAAAGAGTACTCTAACAGATCAACTTAG 4509 0.3925 MSSSYSWLTSPSCTLWPIDSSSSTPNLILQWLTFLFLSPCPQRLLLSALDFLFLLFLLAFAAHKFYSRFNSASNSTSSITKPLLQEKDSDYRITFLFKLPLLVTILLAITYTVLGVLAFTQTNNFASWKQIEALFRLFQAVVNIVIVVLMIHEKKFKSFKHPLSLRIYWVANFVIAALFAASAIVRFVTLGEEKLELSLRIDDIFSLVNLPLSVFFFVISIKGSSGIQVIRISDEVAIYPLNSRDRTLSPYASSSILSKSVWLWINPLLNKGYKTPLNLEDVPSLPLECRAEKMSELFQNNWPKADENSKHPVGLTLVRCFWKHVAFTAFLAFIKLCLIYVGPLLIQSFIEFTSRKDSTAGEGIVLILILFVAKSVEVLSAHQYNFQCQKLGMLIRSSIITSVYKKGLRLSSSSRQTHGTGQIVNHMAVDAQQLSDMMMQLHPIWLMPLQVTAALVLIYSYIGVSAVAAFLGSAVVFFFTTYRTKSSNGFQFQIMTSRDLRLKATNELLNNMRVIKFQAWEEYFGNKIRKFREAEHGWIGKFLYNFAVNYGVLSAAPLVVTVLTFGTATFIGIPLNPGTVFTITSIIQILQEPLRSFPQALMMVSQAIISLARLDEFMMSREMDENAVQKVENCDGDIAVEIKDGKFSWDDNDENDALRVEELEIKKGNHAAVVGTVGSGKSSLLASLLGEMFKISGKVRVCGTTAYVAQTSWIQNATIKENILFGLPMNMDKYRETLRVCCLEKDLEMMEDGDETEIGERGINLSGGQKQRIQLARAVYQDTDIYLLDDVFSAVDAQTGSFIFKECIMGTLKDKTVLLVTHQVDFLHNVDSIMVMRDGRVVQSGKYDDLLKAGLDFGALVAAHESSMEIAETGDKTSDDSAESPKLARIASKEKESGGEKQSSQDQSKSDNKTAAKLIEDEGRETGHVSLKVYKQYFTEAFGWWGIALVVAMSAGWVLSFLACDYWLAIATSDGSGISSVTFISVYAAIAVVACIVVIVRAFLYTYLGLKTSQSFFVGMLQSILHAPMSFFDTTPSGRILSRVSTDILWVDITIPMFANFVMIAYLTLLSILIVTCQNSWETVFLLIPLVWLYNWYRKYYLATSRELTRLDSITKAPVIHHFSETLSGVMTIRSLRKQNAFSQENIDRVNASLRMDFHNNGANEWLGFRLDYMAVVFLCIATFFMIFLPSAIVKPEYVGMSLSYGLALSGLLSFAIYMSCNVENKMVSVERIKQFTNLPSEAPWKIADKSVPQNWPSHGTIELNNLQVRYRPNTPLVLKGVSLTIQGGEKVGVVGRTGSGKSTLIQVLFRMIEPSAGNIIIDGINISTVGLHDLRSRFGIIPQDPVLFQGTVRTNIDPLGLYSEDEIWKSLERCQLKDVVAAKPEKLEALVVDGGDNWSVGQRQLLCLGRIMLKRSRILFMDEATASVDSQTDAVIQKIIREDFADRTIISIAHRIPTVMDCDKVLVIDAGFAKEYEKPSRLLERASLFAALVKEYSNRST 1502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02706 1502 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 326 606 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi4g02706 1502 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1262 1496 IPR003439 GO:0005524
Vivi4g02706 1502 FunFam ABC transporter C family member 5 910 1243 - -
Vivi4g02706 1502 FunFam ABC transporter C family member 4 623 882 - -
Vivi4g02706 1502 ProSitePatterns ABC transporters family signature. 765 779 IPR017871 GO:0005524|GO:0016887
Vivi4g02706 1502 Gene3D - 635 866 IPR027417 -
Vivi4g02706 1502 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 640 863 IPR003439 GO:0005524
Vivi4g02706 1502 CDD ABCC_MRP_domain2 1260 1480 - -
Vivi4g02706 1502 Pfam ABC transporter transmembrane region 327 594 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi4g02706 1502 Pfam ABC transporter transmembrane region 947 1189 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi4g02706 1502 CDD ABCC_MRP_domain1 640 840 - -
Vivi4g02706 1502 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 944 1225 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi4g02706 1502 SUPERFAMILY ABC transporter transmembrane region 944 1244 IPR036640 GO:0005524|GO:0016020
Vivi4g02706 1502 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 637 859 IPR027417 -
Vivi4g02706 1502 Pfam ABC transporter 662 791 IPR003439 GO:0005524
Vivi4g02706 1502 SMART AAA_5 667 848 IPR003593 GO:0016887
Vivi4g02706 1502 SMART AAA_5 1288 1472 IPR003593 GO:0016887
Vivi4g02706 1502 FunFam ABC transporter C family member 3 1245 1496 - -
Vivi4g02706 1502 FunFam ABC transporter C family member 10 309 622 - -
Vivi4g02706 1502 Pfam ABC transporter 1279 1427 IPR003439 GO:0005524
Vivi4g02706 1502 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 251 1498 - -
Vivi4g02706 1502 CDD ABC_6TM_ABCC_D2 943 1237 IPR044726 GO:0140359
Vivi4g02706 1502 CDD ABC_6TM_ABCC_D1 327 614 IPR044746 GO:0140359
Vivi4g02706 1502 MobiDBLite consensus disorder prediction 891 914 - -
Vivi4g02706 1502 Coils Coil 1133 1153 - -
Vivi4g02706 1502 SUPERFAMILY ABC transporter transmembrane region 316 614 IPR036640 GO:0005524|GO:0016020
Vivi4g02706 1502 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1252 1495 IPR027417 -
Vivi4g02706 1502 Gene3D ABC transporter type 1, transmembrane domain 909 1243 IPR036640 GO:0005524|GO:0016020
Vivi4g02706 1502 Gene3D ABC transporter type 1, transmembrane domain 311 623 IPR036640 GO:0005524|GO:0016020
Vivi4g02706 1502 Gene3D - 1246 1496 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02706 Vivi-Chr4 129108203 129114473 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02706 640 892 Calmodulin-binding Proteins AT2G36910 30.325 4.31e-26 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02706 - K05665 gmx:100780167 2351.24