Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02704 ATGAAACCTTATCAGTTATCATCATCATCATCATCATCATCACATAATAGTCTTTTAACCATGTCTTCTTCTTCATGGCTAACTTCTCCTTCATGCACCCTTTTACCTATAGATTCATCTTCCTCTACACCAAACCTCATACTTCAATGGTTAACCTTTCTTTTTCTATCTCCATGTCCTCAGAGACTTCTTCTTTCTGCTCTTGATTCATTGTTTTTGCTCTCTCTCTTAGCTTTTGCAGCTCGGAAACTCTACTCGAGATTCAACTCAACTACCAACTCTACCTCATCTATCACAAAACCACTTCTGCAGGAGAAAGATTCTGACTATAGAATCACCTTTTGGTTCAAACTACCTTTGTTGGTAACTATCCTTTTGGCTATAGCTTACACTGTTCTAGGAGTCTTGGCTTTTACGCAAACAAACTTTGCTTCATGGAAACTAATAGAAGCACTTTTTCGATTTTTTCAAGCAGTAGTCAACATAGTGATAGTGATTTTAATGATTCATGAGAAAAAATTCAAATCTACTAAACACCCTTTATCATTAAGAATCTATTGGATAGCGAATTTTGTGATTGCTACTTTGTTTGTTGTTTCGGCTATTGTTCGAATAGTTACTGTTGGTGAAGCGAATTTGGAACTTAGTTTGAGAATAGATGACATATTCTCATTGATTAATCTTCCATTATCTGTGTTCTTTTTTGTGATAGCTATAAAAGGGTCATCAGGGATTCATGTGATAAGAATATCTGATGTAGTAGTAGCAACATATCGGTTGAATTCAACCGATAGAACTTTGAGTCCTTATGCTTGTTCATCATTTTTGTCCAAAACAGTTTGGTATTGGATGAACCCTTTGATTAATAGAGGTTACGAAACACCGCTTAAACTTGAAGATGTACCTTCACTTCCTCTAGAATTTAGAGCAGAAAAAATGTCAGAACTTTTTCAAAACAATTGGCCAAAGCCAGAGGAAAATAGTAAGCATCCAGTTGGAGTAACCTTATTGAGGTGTTTTTGGAAACACATAGCTTTCACTGGCTTACTTGCAATCATTAGGCTTTGTGTTATGTATGTTGGTCCAATGCTGATTCAGAGTTTTGTTGATTTCACATCGAGAAAAGATAGTACTACTAGGGAAGGCATTGTTTTGATATTGATCCTTTTTGTAGCAAAATCAGTTGAAGTACTTAGTGTTCATCAATTCAACTTCCACTCTCAGAAACTTGGTATGCTTATTCGTTCGAGCATAATCACTTCGGTTTACAAAAAGGGTTTAAGGTTGTCAAGTTCTTCAAGACAAGCTCATGGAACTGGCCAGATTGTGAACCACATGGCTGTTGATGCTCAACAGCTCTCAGATTTGATGATGCAGTTTCATCCTATTTGGCTGATGCCACTACAAGTTGCAGCTGCTCTAATTCTTATGTATAGCTATGTTGGTATATCAGTTCTTGCAGCATTGCTTGGAACCACCGTTGTGTTTCTCTTCACGTTATATCGGACGAAGAGTAGCAACAGCTTCCAGTTTCGGATAATGACGAGCCGCGACTCGAGGATGAAGGCGACAAACGAGCTGCTTAACAACATGCGAGTGATAAAGTTTCAAGCGTGGGAAGATTACTTTGGTAACAAAATTCGACAGTTTCGTGAAGCCGAGCATGGATGGATTGGGAAATTCTTGTACTATTTCGCTGTTAACATGGGAGTTTTGTCCACTGCTCCACTAACTGTAACTGTTCTTACCTTTGGAACTGCGACTTTCATTGGAATTCCTTTGAATGCTGGCACTGTTTTCACAATAACTTCGATAATTAAGATACTTCAGGAGCCTGTGAGAACTTTTCCTCAGGCTCTTATCATGATTTCGCAAGCAACAATCTCTTTAGGGAGGTTGGATGAGTTTATGGTGAGTAAGGAAATGGATGAGAATGCAGTGCAAAGAGAGGAGAATTGTGATGGTGATGTAGCTGTAGAGATAAAAGATGGGAAATTCTCATGGGATGATAAGGAAGAGAATGAGACTTTGAAAGTTGATGAGTTGGTGATTAAGAAAGGGGATCATGCTGCTGTGGTAGGAACTGTTGGTTCAGGCAAGTCTTCATTACTGGCATCTGTGTTGGGAGAAATGTTCAAGATCTCAGGAAAGGTAAGAGTTTGTGGGACGACAGCGTATGTAGCACAGACATCATGGATTCAGAATGCAACCATCAAAGAAAATATATTGTTTGGTTTACCAATGAACATGGACAAGTACAAGGAAGCTTTAAGAGTATGCTGTCTTGAGAAGGATCTTGAAATGATGGATGATGGTGACGAAACCGAGATTGGAGAGCGCGGAATAAACCTCAGTGGTGGTCAGAAACAACGCGTGCAGCTTGCTAGAGCTGTATATCAGGACACTGACATCTATCTCCTTGATGATGTATTCAGTGCTGTTGATGCACAAACAGGATCTTATATTTTTAAGGAATGTATAATGGGAACTCTGAAACATAAGACGGTTTTACTTGTAACCCACCAAGTTGATTTCCTGCATAATGTTGACTCTATAATGGTGATGCGTGAAGGAAGAGTAGTGCAAAGTGGAAAGTATGACGAACTTCTCAAAGCAGGCCTAGATTTTGGTGCACTTGTGGCAGCTCATGAATCCTCTATGGAGATGGCAGAAACAAGTGATAATTCCAATGATGATTCTTCTCAGTCTCCAAAACTCGCCCGCATCGCTTCAAAAGAAAAAGAAAACGCGGGCGAAAAGCAGTCTTCTCAAGATCAATCTAAGCCTGATAAGACAGCAGCAAAGCTCATTGAAGATGAGGAAAGAGAGACAGGACGAGTAAACCTTAAAGTATACAAACATTATTTCACAGAAGCATTTGGATGGTGGGGAATAGCACTCATGGTAGCAATGTCAGTGGCTTGGATGTTAGCATTTTTGGCTGGTGATTATTGGCTAGCAATTGCAACTTCGGATGATTCTAGCATTCCTTCTTTCACTTTCATTATCGTCTATGCTGTTATAACTGTTGTTTCATGCATAGTGGTCATGGTAAGATCTCTCTTGTTTACATATTGGGGTCTAAAGACATCTCAAAGCTTCTTCATTGGAATGCTTCAAAGTATCCTTCATGCACCAATGTCATTCTTCGATACCACTCCTTCTGGCAGAATTTTGAGTCGTGTATCTACTGATCTACTTTGGGTGGATATATCAATTCCAATGTTGATAAACTTTGTAACGATATCATACTTATCATTATTCAGTATCCTCATTGTCACATGCCAGAACTCTTGGGAGACTGTCTTCCTCTTAATTCCACTGTTTTGGTTCAACAACTGGTATAGGAAATATTATCTTGCAACTTCTAGGGAATTGACTCGACTTGATTCAATCACAAAAGCTCCAGTGATTCATCACTTTTCAGAGACGATTTCTGGTGCTATGACAATCCGTAGCTTAAGAAAACAGAATGAATTTTCTCAGGAAAATATTGACAGGGTGAATGCAAGTCTAAGAATGGATTTCCATAACAATGGTGCAAATGAATGGCTCGGTTTTCGGTTGGACTATATGGGAGTGGTTTTCCTTTGCATTGCCACCCTTTTTATGATCTTTTTGCCAAGTGCTATTGTTAAGCCAGAATATATTGGTATGTCTTTATCCTATGGCTTGGCATTGAGCAGTCTCTTGTCATTTACCATATCGATGACTTGTTCGGTTGAGAACAAAATGGTTTCAGTTGAGAGGATAAAGCAGTTTACTAACCTCCCATCAGAAGCTCCATGGAAAATAGCAGATAAGTCTCCGCCTCAGAATTGGCCTAGTCATGGAACTATAGAGCTAAATAATTTACAGGTTAGGTACAGGCCAAATACTCCTCTAGTTCTTAAGGGACTCTCTCTAACCATTGAAGGCGGAGAAAAAGTTGGTGTTGTTGGCCGTACAGGAAGTGGAAAATCAACACTCATCCAAGTTTTATTTAGGTTGATTGAGCCTTCCGCCGGGAATATAATCATTGATGGTATCAACATTTCGAATGTTGGCCTTCATGATTTGAGGTCACGTTTTGGAATTATTCCACAAGATCCTGTCCTCTTTCAAGGAACAGTTAGAACCAACGTTGATCCTCTTGGATTGTACTCAGAAGATGAAATTTGGAAGAGTCTTGAGCGGTGCCAATTGAAAGATGTGGTAGCTGCAAAGCCAGAGAAACTTGAGGCATTAGTGGTTGATGGTGGAGACAACTGGAGCGTTGGACAAAGGCAACTTCTATGCTTGGGAAGGATCATGCTAAAACGCAGCCAAATATTATTCATGGATGAAGCAACAGCGTCGGTTGATTCACAAACCGATGCTGTAATACAAAAGATCATCAGAGAAGACTTTGCAGATCGTACAATAATTAGCATTGCTCACAGAATACCAACGGTTATGGATTGCGACAAGGTTTTGGTCATAGACGCAGGTTTGGCAAAGGAATATGAGAAACCATCACGTTTACTTGAAAGGAATTCACTTTTTGCAGCATTGGTTAAAGAGTATTCTAATAGATCAACTTAG 4563 0.3934 MKPYQLSSSSSSSSHNSLLTMSSSSWLTSPSCTLLPIDSSSSTPNLILQWLTFLFLSPCPQRLLLSALDSLFLLSLLAFAARKLYSRFNSTTNSTSSITKPLLQEKDSDYRITFWFKLPLLVTILLAIAYTVLGVLAFTQTNFASWKLIEALFRFFQAVVNIVIVILMIHEKKFKSTKHPLSLRIYWIANFVIATLFVVSAIVRIVTVGEANLELSLRIDDIFSLINLPLSVFFFVIAIKGSSGIHVIRISDVVVATYRLNSTDRTLSPYACSSFLSKTVWYWMNPLINRGYETPLKLEDVPSLPLEFRAEKMSELFQNNWPKPEENSKHPVGVTLLRCFWKHIAFTGLLAIIRLCVMYVGPMLIQSFVDFTSRKDSTTREGIVLILILFVAKSVEVLSVHQFNFHSQKLGMLIRSSIITSVYKKGLRLSSSSRQAHGTGQIVNHMAVDAQQLSDLMMQFHPIWLMPLQVAAALILMYSYVGISVLAALLGTTVVFLFTLYRTKSSNSFQFRIMTSRDSRMKATNELLNNMRVIKFQAWEDYFGNKIRQFREAEHGWIGKFLYYFAVNMGVLSTAPLTVTVLTFGTATFIGIPLNAGTVFTITSIIKILQEPVRTFPQALIMISQATISLGRLDEFMVSKEMDENAVQREENCDGDVAVEIKDGKFSWDDKEENETLKVDELVIKKGDHAAVVGTVGSGKSSLLASVLGEMFKISGKVRVCGTTAYVAQTSWIQNATIKENILFGLPMNMDKYKEALRVCCLEKDLEMMDDGDETEIGERGINLSGGQKQRVQLARAVYQDTDIYLLDDVFSAVDAQTGSYIFKECIMGTLKHKTVLLVTHQVDFLHNVDSIMVMREGRVVQSGKYDELLKAGLDFGALVAAHESSMEMAETSDNSNDDSSQSPKLARIASKEKENAGEKQSSQDQSKPDKTAAKLIEDEERETGRVNLKVYKHYFTEAFGWWGIALMVAMSVAWMLAFLAGDYWLAIATSDDSSIPSFTFIIVYAVITVVSCIVVMVRSLLFTYWGLKTSQSFFIGMLQSILHAPMSFFDTTPSGRILSRVSTDLLWVDISIPMLINFVTISYLSLFSILIVTCQNSWETVFLLIPLFWFNNWYRKYYLATSRELTRLDSITKAPVIHHFSETISGAMTIRSLRKQNEFSQENIDRVNASLRMDFHNNGANEWLGFRLDYMGVVFLCIATLFMIFLPSAIVKPEYIGMSLSYGLALSSLLSFTISMTCSVENKMVSVERIKQFTNLPSEAPWKIADKSPPQNWPSHGTIELNNLQVRYRPNTPLVLKGLSLTIEGGEKVGVVGRTGSGKSTLIQVLFRLIEPSAGNIIIDGINISNVGLHDLRSRFGIIPQDPVLFQGTVRTNVDPLGLYSEDEIWKSLERCQLKDVVAAKPEKLEALVVDGGDNWSVGQRQLLCLGRIMLKRSQILFMDEATASVDSQTDAVIQKIIREDFADRTIISIAHRIPTVMDCDKVLVIDAGLAKEYEKPSRLLERNSLFAALVKEYSNRST 1520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02704 1520 MobiDBLite consensus disorder prediction 908 933 - -
Vivi4g02704 1520 CDD ABCC_MRP_domain2 1278 1498 - -
Vivi4g02704 1520 Gene3D ABC transporter type 1, transmembrane domain 334 642 IPR036640 GO:0005524|GO:0016020
Vivi4g02704 1520 Gene3D ABC transporter type 1, transmembrane domain 928 1261 IPR036640 GO:0005524|GO:0016020
Vivi4g02704 1520 Pfam ABC transporter 681 810 IPR003439 GO:0005524
Vivi4g02704 1520 Pfam ABC transporter 1297 1445 IPR003439 GO:0005524
Vivi4g02704 1520 SUPERFAMILY ABC transporter transmembrane region 962 1260 IPR036640 GO:0005524|GO:0016020
Vivi4g02704 1520 FunFam ABC transporter C family member 4 642 901 - -
Vivi4g02704 1520 SUPERFAMILY ABC transporter transmembrane region 336 637 IPR036640 GO:0005524|GO:0016020
Vivi4g02704 1520 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 656 878 IPR027417 -
Vivi4g02704 1520 FunFam ABC transporter C family member 10 328 641 - -
Vivi4g02704 1520 Pfam ABC transporter transmembrane region 984 1207 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi4g02704 1520 Pfam ABC transporter transmembrane region 346 613 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi4g02704 1520 CDD ABC_6TM_ABCC_D2 961 1255 IPR044726 GO:0140359
Vivi4g02704 1520 CDD ABCC_MRP_domain1 659 859 - -
Vivi4g02704 1520 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1280 1514 IPR003439 GO:0005524
Vivi4g02704 1520 FunFam ABC transporter C family member 3 1263 1514 - -
Vivi4g02704 1520 Coils Coil 1151 1171 - -
Vivi4g02704 1520 SMART AAA_5 1306 1491 IPR003593 GO:0016887
Vivi4g02704 1520 SMART AAA_5 686 867 IPR003593 GO:0016887
Vivi4g02704 1520 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 962 1243 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi4g02704 1520 MobiDBLite consensus disorder prediction 888 907 - -
Vivi4g02704 1520 Gene3D - 1263 1514 IPR027417 -
Vivi4g02704 1520 Gene3D - 654 885 IPR027417 -
Vivi4g02704 1520 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 272 1516 - -
Vivi4g02704 1520 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 345 625 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi4g02704 1520 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1269 1513 IPR027417 -
Vivi4g02704 1520 MobiDBLite consensus disorder prediction 887 933 - -
Vivi4g02704 1520 ProSitePatterns ABC transporters family signature. 784 798 IPR017871 GO:0005524|GO:0016887
Vivi4g02704 1520 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 659 882 IPR003439 GO:0005524
Vivi4g02704 1520 FunFam ABC transporter C family member 5 928 1261 - -
Vivi4g02704 1520 CDD ABC_6TM_ABCC_D1 346 633 IPR044746 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02704 Vivi-Chr4 128976791 128982587 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02704 659 871 Calmodulin-binding Proteins AT2G36910 29.956 6.31e-22 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02704 - K05665 gmx:100780167 2454.86