Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02697 ATGCTTAGTCCTGAAGGTGAACTGAAAATAAGTTTCGGCTATCAATGCAATGAAGACAAAGGTATCCCCTGCAAGGTTGCCAAAGGGTACAAAATCCTTCCTGAAATGCGAAGAACAAGCAGTTTCTCTTGCTTGTCTGGTGCTGCCTTGAGTGCAAATGCTACACTTGCCAACACAAACATCTGCAATGGTGTTATAGGAGAAGAAATCCTTCCGAATTTGGACTCTCCTAATTCATTTCGGCGGGTACCCTCTTCGCCGTGTCTTGGAATGTTGGATATGCTATCATCTTCTCTCCCAAGTAGTTTGTCAAACCTAAGTTGCAGCCCGTCCAGTCCAAGTCATATGCTTGAATACGACCCTTGTTCGTTAAGACTCATGAGTCCTTCCTCTAGAAATGAAAGTTTTCTCAGTGCTACAGAAGTACAGGTAGCAGGAGGAGCTGCTGGTGAAGATAGGGTTCAAGCAGTTTGTTCTGAAGAAAATGGTTGGCTATTTTGTGCAATTTATGACGGATTCAACGGGAGAGATGCGGCAGACTATCTCGCCTGTACTCTTTACGACTCTATTGTATCTTATCTGAATAAAATAGATTGGAATTCAGAACCGAATTCCATCAACGCTTCTGACAATATCGGTTTGGGTGATAGTTGTGTTCTTGATCACGAGCATCAATCTTCATCAAACAAATCATTTTCGCATGTGGTACTTGATAGCCTCAAACATGTTCTTGATCAGGTTGAGAATGATTTCTTGTACATGGTTGAGCAGGAAATGGAGGAACGTCTGGATTTAGTTTCGATTGGATCTTGTGTTTTACTCGTGCTTCTTCATGGAAATGATTTGTGTACGCTCAATCTTGGTGATAGCAGAGCCGTGCTTGCAACGAGCAGTACAGGTAACGGAGTGAACGGGAGTGAGAGGTTGAAAGCTATTCAGCTTACTGATAGTCATACTGTTGACAATGACAGTGAAAGAGCTCGACTTCTTGCTGAGCATCCTGATGATCCTAAGACCATTGTAGCAGGGAGAGTGAAAGGAAAGTTGAAGGTTACGCGTGCTTTTGGAGTTGGGTACTTGAAAAAGAAATTTCTGAATGATGCATTAATGGGAATCCTCCGAGTTCAAGATCTTAGAAGCCCACCATACGTTTCAACGGATCCATCATTGAACGTGCATAAAATCTCTCCTTCCGATCAATTTGTTATAGTTGCAAGTGATGGTTTATTCGACTTCTTCAACAATGAAGAAGCAGTAAATCTTGTGGAGTCTTACATCTTGCGCAATCCTCATGGTGATCCTGCCAAATATCTCATCGAAAAACTAGTAACAAAAGCAGCTGATTCTGCAGGTTTCAGCACGGAGGAGTTGATGAATGTTCCGGCTGGAAGTAGGAGGAAATATCACGACGACGTCACTGTAATGGTGATCATCCTTGGGATGAATAAACGGACTTCAAAGGCGTCGATTTGCATCTAG 1479 0.4266 MLSPEGELKISFGYQCNEDKGIPCKVAKGYKILPEMRRTSSFSCLSGAALSANATLANTNICNGVIGEEILPNLDSPNSFRRVPSSPCLGMLDMLSSSLPSSLSNLSCSPSSPSHMLEYDPCSLRLMSPSSRNESFLSATEVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADYLACTLYDSIVSYLNKIDWNSEPNSINASDNIGLGDSCVLDHEHQSSSNKSFSHVVLDSLKHVLDQVENDFLYMVEQEMEERLDLVSIGSCVLLVLLHGNDLCTLNLGDSRAVLATSSTGNGVNGSERLKAIQLTDSHTVDNDSERARLLAEHPDDPKTIVAGRVKGKLKVTRAFGVGYLKKKFLNDALMGILRVQDLRSPPYVSTDPSLNVHKISPSDQFVIVASDGLFDFFNNEEAVNLVESYILRNPHGDPAKYLIEKLVTKAADSAGFSTEELMNVPAGSRRKYHDDVTVMVIILGMNKRTSKASICI 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02697 492 ProSiteProfiles PPM-type phosphatase domain profile. 136 479 IPR001932 -
Vivi4g02697 492 Pfam Protein phosphatase 2C 216 446 IPR001932 -
Vivi4g02697 492 CDD PP2Cc 149 479 IPR001932 -
Vivi4g02697 492 SMART PP2C_4 127 477 IPR001932 -
Vivi4g02697 492 Gene3D - 106 488 IPR036457 -
Vivi4g02697 492 SUPERFAMILY PP2C-like 146 480 IPR036457 -
Vivi4g02697 492 PANTHER PROTEIN PHOSPHATASE 2C 140 477 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02697 Vivi-Chr4 128912311 128915295 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02697 4 492 PP2C-type Phosphatase Gene Family AT3G16560 64.800 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02697 - - tpra:123885607 814.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g02697 4 128912311 128915295 Vivi4g02697 4 128912311 128915295 ECH
Vivi1g01169 1 24457152 24459881 Vivi4g02697 4 128912311 128915295 PCT