Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02693 ATGGCTGATACATCTGGAATGGCTGAAGAGGAAACACAAGTGTCTTCTAGTGACGAGATTGATCCAAGGATGGATGTCTATGTGTGGGACATGGATGAGACCCTTATACTTCTCAATTCCTTGATGAAATCATCCTATGTCGAGGCTTTTAACGGTCTAAAGGATGTGCCGAAATGTGTCGAGCTTGGGAGGATTGATGGAGTTTTTGTGTTGCAGATTGAGAATTACATTAAGTTGTTTCTTGATGTTATGTCCAAATATGATGATGGAAGGGACCTATTTGATTATGACTTCAACAAAGATGAATTAGGGCCCCCACATGATGATGTCAACAAAAGAAAACTTGCTTATAGACCAAAAATACTTGCAGATGGGAATGAAGATGGAGTGAATGAAATACAAGAGATTCAATCCAATATCAAGTAA 426 0.3873 MADTSGMAEEETQVSSSDEIDPRMDVYVWDMDETLILLNSLMKSSYVEAFNGLKDVPKCVELGRIDGVFVLQIENYIKLFLDVMSKYDDGRDLFDYDFNKDELGPPHDDVNKRKLAYRPKILADGNEDGVNEIQEIQSNIK 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02693 141 PANTHER EYES ABSENT 16 120 IPR028472 GO:0004725
Vivi4g02693 141 Gene3D - 25 140 IPR038102 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02693 Vivi-Chr4 128679000 128679882 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02693 21 130 Protein tyrosine phosphatase (PTP) family AT2G35320 48.333 1.69e-31 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02693 - - vvo:131597856 286.96