Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02680 ATGGCTGCTACATCTGGGATAGCTGAAGAGGAAACACAAGTGTCTTCTAGTGACGAGATCGATCCAAGGCTGGATGTCTATGTGTGGGACATGGATGAGACCTTTATACTACTCAATTCCTTGCTGAAATCATCCTATGCCGAGGCTTGGGAGGATGTGGGAAAATCTCTTTCTGCAAGTGTGATGATAATTTCTTCTATGACCAAATTGAGAATTACAATAAGCCGATTCTTGATGTTATGTCCAAATATGATGATGGGAAGGACCTATCTGATTATGGACTGGTTTGTTGATGTGCTGAATGTTGGAGGCGCTGGGTTGAAGTGTTGA 330 0.4273 MAATSGIAEEETQVSSSDEIDPRLDVYVWDMDETFILLNSLLKSSYAEAWEDVGKSLSASVMIISSMTKLRITISRFLMLCPNMMMGRTYLIMDWFVDVLNVGGAGLKC 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02680 109 Gene3D - 25 80 IPR038102 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02680 Vivi-Chr4 128197325 128199103 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02680 21 50 Protein tyrosine phosphatase (PTP) family AT2G35320 63.333 3.85e-06 42.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02680 - K17620 vvo:131595192 217.624