Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02679 ATGGAAGATAAACTAATTGATATGCTTATTGAAAAGTTGAATCGCTTTGTTATTGACTGCAATTTGAATTCCTCAACAGATTTCTTTAACTGGAATAGAGTCAAATTAAGGTATTGTGATGGAGCATCTTTTACTGGAGATAGTGAAAATGAGGCTGCACGGCTTCAATTTCGAGGACAAAAAATATGGCTAGCTGCAATAGAGGAATTGATGTCTCAAGGAATGGATAATGCCGAACAGGCCCTTCTCTTTGGATGCTCTGCGGGCGGTCTTGTATCAATAATACATTACGATGAGTTCCAGAGCTTGTTACCAAAATCTTCCAAAGTGAAGTGTTTTAGTGATGCCGAATTTTTTCTTGATGCGAAGTACAAAAAAATTTGCCAAAAAATTGTCTCAACAAACTGGACCGAACTTCGTGCTTCTTTCCTCAGAATTTGGTTGAACATATTGAGACGCCATTGTTTCTACTCAACGTGGCTTATGATGTGTGGCAGGAATAAGAAAAGGAAGAATATATACTCTTGGAATGGAATCTAA 540 0.3741 MEDKLIDMLIEKLNRFVIDCNLNSSTDFFNWNRVKLRYCDGASFTGDSENEAARLQFRGQKIWLAAIEELMSQGMDNAEQALLFGCSAGGLVSIIHYDEFQSLLPKSSKVKCFSDAEFFLDAKYKKICQKIVSTNWTELRASFLRIWLNILRRHCFYSTWLMMCGRNKKRKNIYSWNGI 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02679 179 PANTHER NOTUM-RELATED 23 131 IPR004963 GO:0016787
Vivi4g02679 179 Pfam Pectinacetylesterase 23 132 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02679 Vivi-Chr4 128176680 128179582 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02679 23 122 Carbohydrate Esterase AT2G46930 66.000 2.16e-44 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02679 K19882 - vvo:131599650 342.813