Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02677 ATGTTGAAATCACTGACCTTCAAACCCATCTTTCTCAACCTCACAACAACAACACTCTTTCCAATCTTTAAATTCAATTCTCGTTACTCTTCAACCACTTCACATCAAAACCAATTCACCGTCTCATATCTCGTTACCAATTTCGGTTTCTCCTCAGAAACCGCTAGAAAAGCTTCAAAACACTTTCATTTCGACACTTCCGAAAAGCCCGATTCAGTAATCACCATCTTCAGAAACTACGGTTTCTCTGATTCCCAGATAAACAACCTTGTTAGACAGGCACCCAACATTCTTAAATGTGACCCCCACAAAAGGGTTTTGCCAAAGTTTCAATTTTTACTCTCAAAGGGTGCTTCAAATTCTGACATTGTGGAGATTGTGGTCAGAAGCCCTAGGATTCTCTATTCAAGTCTTGACAATTGCATACTCCCTACTTTTGAATTGGTAAGAAGGTTCCTTCCATCTAACGAGAAAGTTATTGAACGAATACTTCAATGTAAGTTTTTCTTTGGTCATTATCATGTTATTAGGAATGTGAAGTTGTTGCTTGATTATGGAGTCACTGACTCAAATATAAGACACTTGTTACTTAAAAGACCGTCTATATTGTTGTCTTATGACATGAGGGGTGCTTTGGATATGGTTAAGGAATTGGGGTTTAATGATCCTTCCAATGTGAATTTTTGTATAGCATTGTTAGCCAAAAGGGCCATGTCGGAATCTAGGTGGGATGAGAAAGTTGTTGCCTTTAAGAAATGGGGTTGGTCTGATGAAATGGTTCTCGAAGCGTTTAGGAAGCGACCGTTGTGTATGCTATCATCCACAGAGAAAATTAATAAGGTCATGAGATTTTGGGTGAATGAGTTGGGTTGGAACTCGTTGGCTCTTGTCAAAAGGCCGGATATTTTTTCATATAGTTTGGAGAATAGGATCATTCCGAGGGCTTGTGTTGTTTCATATCTGATCTCGAAAGGTTTGATGGAAAATAATGTTGAATTGTCTACCCCTTTTGCTGTTAATGAAAAGGTGTTTCTTGAAAAGTATGTGCAATGTTTTGAAGAGGAAAGACATAATTTGTTAAAGCTATACCACGAGAAAATGAATGGTAAGAAGATCAAGGAAAATGGTGAAGTGCCTGTAAGCTATTGA 1149 0.3803 MLKSLTFKPIFLNLTTTTLFPIFKFNSRYSSTTSHQNQFTVSYLVTNFGFSSETARKASKHFHFDTSEKPDSVITIFRNYGFSDSQINNLVRQAPNILKCDPHKRVLPKFQFLLSKGASNSDIVEIVVRSPRILYSSLDNCILPTFELVRRFLPSNEKVIERILQCKFFFGHYHVIRNVKLLLDYGVTDSNIRHLLLKRPSILLSYDMRGALDMVKELGFNDPSNVNFCIALLAKRAMSESRWDEKVVAFKKWGWSDEMVLEAFRKRPLCMLSSTEKINKVMRFWVNELGWNSLALVKRPDIFSYSLENRIIPRACVVSYLISKGLMENNVELSTPFAVNEKVFLEKYVQCFEEERHNLLKLYHEKMNGKKIKENGEVPVSY 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02677 382 Pfam mTERF 238 344 IPR003690 GO:0003690|GO:0006355
Vivi4g02677 382 Pfam mTERF 75 221 IPR003690 GO:0003690|GO:0006355
Vivi4g02677 382 PANTHER CGI-12 PROTEIN-RELATED 36 353 IPR003690 GO:0003690|GO:0006355
Vivi4g02677 382 Gene3D Transcription termination factor 3, mitochondrial 156 362 IPR038538 -
Vivi4g02677 382 SMART mt_12 124 155 IPR003690 GO:0003690|GO:0006355
Vivi4g02677 382 SMART mt_12 293 327 IPR003690 GO:0003690|GO:0006355
Vivi4g02677 382 SMART mt_12 193 221 IPR003690 GO:0003690|GO:0006355
Vivi4g02677 382 SMART mt_12 261 292 IPR003690 GO:0003690|GO:0006355
Vivi4g02677 382 SMART mt_12 88 119 IPR003690 GO:0003690|GO:0006355
Vivi4g02677 382 FunFam Mitochondrial transcription termination factor-like 138 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02677 Vivi-Chr4 128167850 128171076 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi4g02677 mTERF 3.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02677 K15031 - gmx:102666622 394.045