Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02676 ATGATGGGCACACTATCTTGCTTCTGCATCTTTTTCCCACACGACAAATCATGGAACACTCCATTGTTGAAAATGAAAATCCTAAATCCATTCCCAAATTTCAATTCTTTGAAATCCCTAAATCCAATCCCAATTTTCAATTCTTTGAAATCACACTCTTCAACAACTTCACCACAACAAAACCAATTCACAATTTCATATCTAATTACCAATTTCGGCTTCTCGTTAGAAACCGCTACAAAGGCTTCCAAACGCGTTCATTTCACGACTTCTGAAAAGCCTGATTCAGTAATCGCCATCTTCAGAAACTACGATTTCTCTGATTTCCAGATTAGCAACCTTGTTAGACAGGCACCCAACATTCTTACATGTGACCCCCACAAAAGGGTTTTGCCAAAGTTTCAATTTTTACTCTCAAAAGGTGCTTCAAATTCTGATGTAGTGGAGATTGTGGTCAGAAGCCCTAGAATTCTATATTCAAGTCTTGACAATTGCATAATCCCTACTTTTGAATTGATGAGAAGGTTCCTTCCATCTAATGAGAAAGTTATTGAACGAATACTTCAATGTAAGTTTTTCTTTGGTCATTATACTTTTGTTAATAATTTGAAGTTGTTGCTTGATTATGGAGTCACTGACTCAAATATAAGATATTTGTTACTTAAAAGACCGTCTATATTGTTGTGTGTTGACATGAGGGGTGCATTGGATATGGTTAAGGAAATGGGGTTTAATGATCCTTCCAATGTGAATTTTTGTATAGCATTGTTAGCCAAAAGGGCCATCTCGGAATCTCGGTGGGATGCAAAAGTTATTGTGTTTAAGAAATGGGGTTGGTCTGATGAAATGGTTCTCGAAGCGTTTAGGAAGCGACCGATGTGTATGCTATCATCCATAGAGAAGATTAATAAGGTCATGAGATTTTGGGTGAATGAGTTGGGTTGGAACTCTTTGGCTCTTGTCAAAAGGCCGGATATTTTTGCATATAGTTTGGAGAATAGGATCATTCCGAGGGCTTGTGTTGTTTCATATCTGATCTCGAAAGGTTTGATGGAAAAGAATGTTGAATTGTCTACCCCTTTTGCTGTTAATGAAAAGGTGTTTCTTGAAAAGTATGTGCAATGTTTTGAAGAGGAAAGAAATGATTTGTTAAAGCTATACCAAGAGAAAATGGATGGTAAGAAAATCAAGGAAAATGGTGAAGTGCCTGTAAGCTATTGA 1221 0.3686 MMGTLSCFCIFFPHDKSWNTPLLKMKILNPFPNFNSLKSLNPIPIFNSLKSHSSTTSPQQNQFTISYLITNFGFSLETATKASKRVHFTTSEKPDSVIAIFRNYDFSDFQISNLVRQAPNILTCDPHKRVLPKFQFLLSKGASNSDVVEIVVRSPRILYSSLDNCIIPTFELMRRFLPSNEKVIERILQCKFFFGHYTFVNNLKLLLDYGVTDSNIRYLLLKRPSILLCVDMRGALDMVKEMGFNDPSNVNFCIALLAKRAISESRWDAKVIVFKKWGWSDEMVLEAFRKRPMCMLSSIEKINKVMRFWVNELGWNSLALVKRPDIFAYSLENRIIPRACVVSYLISKGLMEKNVELSTPFAVNEKVFLEKYVQCFEEERNDLLKLYQEKMDGKKIKENGEVPVSY 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02676 406 Gene3D Transcription termination factor 3, mitochondrial 186 386 IPR038538 -
Vivi4g02676 406 SMART mt_12 217 245 IPR003690 GO:0003690|GO:0006355
Vivi4g02676 406 SMART mt_12 112 143 IPR003690 GO:0003690|GO:0006355
Vivi4g02676 406 SMART mt_12 317 351 IPR003690 GO:0003690|GO:0006355
Vivi4g02676 406 SMART mt_12 285 316 IPR003690 GO:0003690|GO:0006355
Vivi4g02676 406 SMART mt_12 148 179 IPR003690 GO:0003690|GO:0006355
Vivi4g02676 406 FunFam Mitochondrial transcription termination factor-like 162 380 - -
Vivi4g02676 406 PANTHER CGI-12 PROTEIN-RELATED 60 377 IPR003690 GO:0003690|GO:0006355
Vivi4g02676 406 Pfam mTERF 100 245 IPR003690 GO:0003690|GO:0006355
Vivi4g02676 406 Pfam mTERF 263 369 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02676 Vivi-Chr4 128102303 128103820 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi4g02676 mTERF 2.6e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02676 K15031 - gmx:102666622 404.06