Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02675 ATGATGGGTACACTCTCTTGCTTCTGCATCTTTCTGCCACATGACAAATCATGGAACACTCCATTGTTGAAAATGAAAATCCTAAAGCCATTCCCAATTTTCAATTCTTTAAAATCCCTAAATCCAATCCCAAATTTCAATTCTTTGAAATCACACTCTTCAACAACTTCACCACAACAAAACCAATTCACAATATCATATCTCGTTACCAATTTCGGCTTCTCGTTAGAAACCGCTACAAAGGCTTCCAAACGCGTTCATTTCACGACTTCCGAAAAGCCCGATTCAGTAATCGCCATCTTCAGAAACTTCGGTTTCTCTGATTCTCAGATAAGCTTCATCGTAAGTAAAGCGCCCAACATTCTTACATGTGACCCCCACAAAAGGATTTTGTCAAAGTTTGAATTTTTACTCTTAAAAGGTGCTTCAAATTCTGATGTAGTGGAGATTGTGGTCAGAAGCCCTAGGATTCTATATTCAAGTCTTGAGAATTGCATAATCCCTACTTTTGAATTGGTAAGAAGGTTCTTTCCATCTAATGAGAAAGTTATTGAATACATACTTAAATGTAGATGTTTCTTTGGTCATCGTAATTTTGTTAATAATGTCAAGTTGTTGCTTGATATTGGAGTCACTGACTCAAATATAAGATATTTGTTACTTGAAACACCGTCTATATTTTTGATTCATGACATGAGGAGTGCTTTGGGTATGATTAAGACAATAGGATTTAACGATCCTTCCAATGTAAATTTTTGTTTAGCATTGTTAGCGGATAGGGCCATGTCAGAATCCAAAGTTATTGTGTTTAAGAAATGGGGTTGGTCTGATGAAATGATTCTTGAAGCATTTAGGAAGCGACCGTTGTGTCATCTATCATCCACAGAGAAAATTAATAAGGTCATGAGATTTTGGGTGAATGAGTTGGGTTGGTGCTCTTCGACTCTTGCCAAAAAGCCGGATATTTTTTCCTATAGTTTGGAGAATAGGATCATTCCGAGGGCCTCTGTTGTTTCATATCTGATCTCCAAAGGTTTGATAGAAAAGAATGTTGAATTGTCTACCCCTTTTGCTGTTAAGGAAAAGGTGTTTCTTGAAAAGTATGTGCAATGTTTTGAAGAGGAGAGACATAATTTGTTAAAGCTATACCATGAGAAAATGGATGGTAAGAAAATCAAGGAAAATGGTGAAGTGTCTGTAAGCGATTGA 1209 0.3648 MMGTLSCFCIFLPHDKSWNTPLLKMKILKPFPIFNSLKSLNPIPNFNSLKSHSSTTSPQQNQFTISYLVTNFGFSLETATKASKRVHFTTSEKPDSVIAIFRNFGFSDSQISFIVSKAPNILTCDPHKRILSKFEFLLLKGASNSDVVEIVVRSPRILYSSLENCIIPTFELVRRFFPSNEKVIEYILKCRCFFGHRNFVNNVKLLLDIGVTDSNIRYLLLETPSIFLIHDMRSALGMIKTIGFNDPSNVNFCLALLADRAMSESKVIVFKKWGWSDEMILEAFRKRPLCHLSSTEKINKVMRFWVNELGWCSSTLAKKPDIFSYSLENRIIPRASVVSYLISKGLIEKNVELSTPFAVKEKVFLEKYVQCFEEERHNLLKLYHEKMDGKKIKENGEVSVSD 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02675 402 Gene3D Transcription termination factor 3, mitochondrial 179 382 IPR038538 -
Vivi4g02675 402 PANTHER CGI-12 PROTEIN-RELATED 60 373 IPR003690 GO:0003690|GO:0006355
Vivi4g02675 402 SMART mt_12 112 143 IPR003690 GO:0003690|GO:0006355
Vivi4g02675 402 SMART mt_12 148 178 IPR003690 GO:0003690|GO:0006355
Vivi4g02675 402 SMART mt_12 313 347 IPR003690 GO:0003690|GO:0006355
Vivi4g02675 402 SMART mt_12 281 312 IPR003690 GO:0003690|GO:0006355
Vivi4g02675 402 SMART mt_12 184 212 IPR003690 GO:0003690|GO:0006355
Vivi4g02675 402 Pfam mTERF 99 288 IPR003690 GO:0003690|GO:0006355
Vivi4g02675 402 Pfam mTERF 258 364 IPR003690 GO:0003690|GO:0006355
Vivi4g02675 402 FunFam Mitochondrial transcription termination factor-like 162 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02675 Vivi-Chr4 128094735 128096267 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi4g02675 mTERF 8.3e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02675 K15031 - gmx:102666622 359.377