Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02674 ATGGTTACAAGTTGTGTTAACATATTGCAATCTTGCTTCTGCATGTTTTTCACACACCACAAATCATGGAACTCTCCAATGTTGAAAATGAAAACCCTAAATCCAATCCCAAATTTCAATTCTTTAATCTGCCACTCTTCAACAACTTCACAACAAAACCACCAATTCACAGTTTCATATCTCGTTTCAAATTTCGGCTTCTCATTAGAAACCGCTACAAAGGCTTCCAAACTCGTTCATTTCAAGGCTTCCCAAAACCCTGATTCAGTAATCACCATCTTCAGAAACTTCGGTTTCTCAGATTCTGATATAAACGACATCGTTAGTAAAGCGCCCAACATTCTTACATGTGACCCCCACAAAAGGATTTTGCCAAAGTTTCAATTTTTACTCTCAAAAGGTGCTTCAAATTCTGATATAGTGGAGATTGTGGTCAGAAGCCCTAGAATTCTCTATTCAAGTCTTGAGAATTGCATAATCCCTACTTTTGAATTGGTAAGAAGGTTCCTTCCATCTAATGACAAAGTTATTCAACATGTACTTAAATGTAGATGTTTCTTTGGTCATAATCATGTTATTAATAATGTGAATTTGTTGCTTGATGATGGAGTCACTGACAAAAATTTAAGATATTTGTTACTTAAAACACCGTCTATATTTTTGATTCGTGACATGAGGAGTGCTCTGGATATGGTTAAGAAAATGGGATTTAATGATCCTTCCAAAGTCAATTTTTGTATAGCATTGTTAGCCAAAAGGGCTATGCCGAAATCTCGGTGGGATGCTAAAGTTACTGTCTTTAAGAGATGGGGTTGGTCTGATGAAATGGTTCTCGAAGCGTTTAGGAAGAGACCTTTGTGTATGCTATCGTCGAAAGAGAAAATTAATGATGTCATGAGATTTTGGGTGAATGAGTTGGGTTGGAACTCTTCGGCTCTTGTCAAAAGGGCGGATATTTTTTCGTATAGTTTGGAGAATAGGACCATTCCGAGGGCTTGTGTTGTTTCATATCTGATCTCGAAAGGTTTGATAGAAAATAATGTTGAATTGTCTACCCCTTTTGCTGTTAATGAAGAGGTGTTTCTTGAAAAGTATGTGCAAAGTTTTAAAGAGGAAAGACATAATTTGTTAAAGCTATACCTGGAGAAAATGGACGGTAAGAAAATCAAGGAAAATGGTGAAGCGTCTGGAAGCTATTGA 1200 0.3658 MVTSCVNILQSCFCMFFTHHKSWNSPMLKMKTLNPIPNFNSLICHSSTTSQQNHQFTVSYLVSNFGFSLETATKASKLVHFKASQNPDSVITIFRNFGFSDSDINDIVSKAPNILTCDPHKRILPKFQFLLSKGASNSDIVEIVVRSPRILYSSLENCIIPTFELVRRFLPSNDKVIQHVLKCRCFFGHNHVINNVNLLLDDGVTDKNLRYLLLKTPSIFLIRDMRSALDMVKKMGFNDPSKVNFCIALLAKRAMPKSRWDAKVTVFKRWGWSDEMVLEAFRKRPLCMLSSKEKINDVMRFWVNELGWNSSALVKRADIFSYSLENRTIPRACVVSYLISKGLIENNVELSTPFAVNEEVFLEKYVQSFKEERHNLLKLYLEKMDGKKIKENGEASGSY 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02674 399 PANTHER CGI-12 PROTEIN-RELATED 53 370 IPR003690 GO:0003690|GO:0006355
Vivi4g02674 399 Gene3D Transcription termination factor 3, mitochondrial 189 379 IPR038538 -
Vivi4g02674 399 SMART mt_12 210 238 IPR003690 GO:0003690|GO:0006355
Vivi4g02674 399 SMART mt_12 310 344 IPR003690 GO:0003690|GO:0006355
Vivi4g02674 399 SMART mt_12 141 172 IPR003690 GO:0003690|GO:0006355
Vivi4g02674 399 SMART mt_12 105 136 IPR003690 GO:0003690|GO:0006355
Vivi4g02674 399 SMART mt_12 278 309 IPR003690 GO:0003690|GO:0006355
Vivi4g02674 399 Pfam mTERF 262 362 IPR003690 GO:0003690|GO:0006355
Vivi4g02674 399 Pfam mTERF 92 296 IPR003690 GO:0003690|GO:0006355
Vivi4g02674 399 FunFam Mitochondrial transcription termination factor-like 155 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02674 Vivi-Chr4 128027752 128029604 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi4g02674 mTERF 2.8e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02674 K15031 - gmx:102666622 384.8